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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183498912
OMGP01000961
343590
Bacillota
GCC
Gly
>WENV183499311
OMGP01009478
280500
Bacillota
TGC
Ala
>WENV183499312
OMGP01009486
221826
Bacillota
ACG
Arg
>WENV183498948
OMGP01001165
302145
Bacillota
GAA
Phe
>WENV183498797
OMGP01000577
280492
Bacillota
CTT
Lys
>WENV183498902
OMGP01000926
280492
Bacillota
CTT
Lys
>WENV183499067
OMGP01001963
291629
Bacillota
CCA
Trp
>WENV183499088
OMGP01002219
287289
Bacillota
GCC
Gly
>WENV183499366
OMGP01016908
184497
Bacillota
GGG
Pro
>WENV183499160
OMGP01003075
184497
Bacillota
GGG
Pro
>WENV183498603
OMGP01000130
184497
Bacillota
GGG
Pro
>WENV183498606
OMGP01000136
179176
Bacillota
ACG
Arg
>WENV183499021
OMGP01001607
184687
Bacillota
CAT
Met
>WENV183499299
OMGP01008822
215243
Bacillota
CAT
Met
>WENV183499221
OMGP01004673
215243
Bacillota
CAT
Met
>WENV183498536
OMGP01000044
82124
Bacillota
TAA
Leu
>WENV183498708
OMGP01000303
73664
Bacillota
CAG
Leu
>WENV183498563
OMGP01000060
73664
Bacillota
CAG
Leu
>WENV183498840
OMGP01000734
73664
Bacillota
CAG
Leu
>WENV183499065
OMGP01001963
186123
Bacillota
GTC
Asp
>WENV183498903
OMGP01000932
186123
Bacillota
GTC
Asp
>WENV183498723
OMGP01000349
284723
Bacillota
TAC
Val
>WENV183499405
OMGP01026839
398835
Bacillota
GCC
Gly
>WENV183499360
OMGP01016519
332181
Bacillota
TGT
Thr
>WENV183498904
OMGP01000932
291634
Bacillota
GAA
Phe
>WENV183498780
OMGP01000494
346451
Bacillota
TTT
Lys
>WENV183499368
OMGP01016964
295350
Bacillota
TGC
Ala
>WENV183499310
OMGP01009478
175916
Bacillota
GAT
Ile
>WENV183498605
OMGP01000134
187364
Bacillota
CAT
Met
>WENV183498785
OMGP01000522
400963
Bacillota
GTT
Asn
>WENV183499283
OMGP01007433
497729
Bacillota
CCA
Trp
>WENV183498730
OMGP01000365
497729
Bacillota
CCA
Trp
>WENV183498686
OMGP01000264
497729
Bacillota
CCA
Trp
>WENV183499163
OMGP01003176
303718
Bacillota
TGT
Thr
>WENV183498610
OMGP01000140
73638
Bacillota
AAG
Leu
>WENV183498562
OMGP01000060
56079
Bacillota
AAG
Leu
>WENV183498561
OMGP01000060
56079
Bacillota
AAG
Leu
>WENV183499086
OMGP01002219
175911
Bacillota
GTC
Asp
>WENV183498673
OMGP01000239
46655
Bacillota
TGA
Ser
>WENV183499330
OMGP01012251
292374
Bacillota
TGC
Ala
>WENV183498695
OMGP01000291
117745
Bacillota
GTA
Tyr
>WENV183498956
OMGP01001189
483485
Bacillota
CCC
Gly
>WENV183498943
OMGP01001158
483485
Bacillota
CCC
Gly
>WENV183498558
OMGP01000059
46643
Bacillota
TGA
Ser
>WENV183498960
OMGP01001201
342104
Bacillota
TAC
Val
>WENV183498725
OMGP01000351
321753
Bacillota
GCC
Gly
>WENV183499171
OMGP01003300
58120
Bacillota
AAG
Leu
>WENV183498934
OMGP01001047
46835
Bacillota
TAA
Leu
>WENV183499070
OMGP01002002
330413
Bacillota
CTT
Lys
>WENV183499137
OMGP01002652
118669
Bacillota
GTA
Tyr
>WENV183498535
OMGP01000044
118669
Bacillota
GTA
Tyr
>WENV183498559
OMGP01000059
280462
Bacillota
GAA
Phe
>WENV183498962
OMGP01001224
398852
Bacillota
CTC
Glu
>WENV183498584
OMGP01000085
398852
Bacillota
CTC
Glu
>WENV183498583
OMGP01000084
398852
Bacillota
CTC
Glu
>WENV183498537
OMGP01000045
398852
Bacillota
CTC
Glu
>WENV183499329
OMGP01012251
201856
Bacillota
GAT
Ile
>WENV183499363
OMGP01016519
289123
Bacillota
GGT
Thr
>WENV183498726
OMGP01000354
321248
Bacillota
TAC
Val
>WENV183499333
OMGP01012542
298260
Bacillota
GTT
Asn
>WENV183498643
OMGP01000185
406186
Bacillota
CTC
Glu
>WENV183499066
OMGP01001963
405393
Bacillota
GCC
Gly
>WENV183498905
OMGP01000932
405393
Bacillota
GCC
Gly
>WENV183498739
OMGP01000390
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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