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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510274
OMHN01001575
400161
Bacteroidota
GGT
Thr
>WENV183510261
OMHN01001204
481267
Bacteroidota
CTG
Gln
>WENV183510307
OMHN01003124
178571
Bacteroidota
GTT
Asn
>WENV183510349
OMHN01007750
172085
Bacteroidota
TAC
Val
>WENV183510346
OMHN01007244
431429
Bacteroidota
CCT
Arg
>WENV183510248
OMHN01000455
30327
Bacteroidota
GCT
Ser
>WENV183510285
OMHN01001781
178133
Bacteroidota
GAT
Ile
>WENV183510269
OMHN01001380
178133
Bacteroidota
GAT
Ile
>WENV183510245
OMHN01000361
400815
Bacteroidota
TTC
Glu
>WENV183510306
OMHN01002932
284236
Bacteroidota
CGG
Pro
>WENV183510366
OMHN01010104
178134
Bacteroidota
TGG
Pro
>WENV183510310
OMHN01003348
178134
Bacteroidota
TGG
Pro
>WENV183510302
OMHN01002721
481044
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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