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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183524193
ONZT01000141
176499
Actinomycetota
CAT
Met
>WENV183524497
ONZT01001052
175907
Actinomycetota
TAC
Val
>WENV183524291
ONZT01000312
349003
Actinomycetota
CCG
Arg
>WENV183524618
ONZT01002301
147806
Actinomycetota
TAA
Leu
>WENV183524373
ONZT01000542
280498
Actinomycetota
GTT
Asn
>WENV183524374
ONZT01000542
280498
Actinomycetota
GTT
Asn
>WENV183524462
ONZT01000825
280498
Actinomycetota
GTT
Asn
>WENV183524593
ONZT01001924
280498
Actinomycetota
GTT
Asn
>WENV183524358
ONZT01000466
295964
Actinomycetota
GTT
Asn
>WENV183524441
ONZT01000800
56083
Actinomycetota
CGA
Ser
>WENV183525037
ONZT01037807
140768
Actinomycetota
TAG
Leu
>WENV183524600
ONZT01002071
176075
Actinomycetota
TCT
Arg
>WENV183524558
ONZT01001658
175848
Actinomycetota
TGG
Pro
>WENV183524712
ONZT01004150
176078
Actinomycetota
GGG
Pro
>WENV183524848
ONZT01010541
482604
Actinomycetota
TTG
Gln
>WENV183524252
ONZT01000259
59689
Actinomycetota
GGA
Ser
>WENV183524812
ONZT01007791
175837
Actinomycetota
ACG
Arg
>WENV183524757
ONZT01005285
175837
Actinomycetota
ACG
Arg
>WENV183524508
ONZT01001168
175837
Actinomycetota
ACG
Arg
>WENV183524391
ONZT01000612
175837
Actinomycetota
ACG
Arg
>WENV183524295
ONZT01000315
29393
Actinomycetota
GCT
Ser
>WENV183524929
ONZT01016425
280549
Actinomycetota
CAC
Val
>WENV183524253
ONZT01000259
349164
Actinomycetota
CTC
Glu
>WENV183524617
ONZT01002297
280702
Actinomycetota
GGC
Ala
>WENV183524298
ONZT01000318
176077
Actinomycetota
CAT
Met
>WENV183524397
ONZT01000623
21508
Actinomycetota
GAG
Leu
>WENV183524559
ONZT01001667
176638
Actinomycetota
GGG
Pro
>WENV183524174
ONZT01000133
280524
Actinomycetota
TGC
Ala
>WENV183524506
ONZT01001157
150272
Actinomycetota
TAA
Leu
>WENV183524293
ONZT01000315
117777
Actinomycetota
>WENV183524175
ONZT01000133
280523
Actinomycetota
GGC
Ala
>WENV183524748
ONZT01004820
280523
Actinomycetota
GGC
Ala
>WENV183524294
ONZT01000315
175949
Actinomycetota
CAT
Met
>WENV183524250
ONZT01000248
176555
Actinomycetota
CAT
Met
>WENV183524561
ONZT01001708
280544
Actinomycetota
GTG
His
>WENV183524509
ONZT01001174
280496
Actinomycetota
CGT
Thr
>WENV183524529
ONZT01001347
280703
Actinomycetota
CCT
Arg
>WENV183524134
ONZT01000088
280450
Actinomycetota
TTT
Lys
>WENV183525036
ONZT01037807
323758
Actinomycetota
CGT
Thr
>WENV183524475
ONZT01000888
56166
Actinomycetota
TGA
Ser
>WENV183524445
ONZT01000814
480329
Actinomycetota
CCC
Gly
>WENV183524534
ONZT01001393
175882
Actinomycetota
TGG
Pro
>WENV183524289
ONZT01000310
99865
Actinomycetota
CAG
Leu
>WENV183524264
ONZT01000275
222475
Actinomycetota
CTT
Lys
>WENV183524144
ONZT01000098
280499
Actinomycetota
CCT
Arg
>WENV183524206
ONZT01000164
398853
Actinomycetota
CTG
Gln
>WENV183524254
ONZT01000259
398853
Actinomycetota
CTG
Gln
>WENV183524368
ONZT01000529
176642
Actinomycetota
CAA
Leu
>WENV183524557
ONZT01001658
175843
Actinomycetota
CAA
Leu
>WENV183524400
ONZT01000637
237585
Actinomycetota
TAC
Val
>WENV183524524
ONZT01001312
203883
Actinomycetota
TCT
Arg
>WENV183524442
ONZT01000801
56075
Actinomycetota
TGA
Ser
>WENV183524511
ONZT01001178
46642
Actinomycetota
CGA
Ser
>WENV183524192
ONZT01000141
117903
Actinomycetota
GTA
Tyr
>WENV183524517
ONZT01001271
280470
Actinomycetota
CGT
Thr
>WENV183524290
ONZT01000310
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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