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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183545008
OOAQ01000189
172207
Bacteroidota
GGG
Pro
>WENV183545053
OOAQ01000301
117741
Bacteroidota
TAG
Leu
>WENV183545561
OOAQ01007655
398829
Bacteroidota
CCT
Arg
>WENV183545704
OOAQ01017553
404226
Bacteroidota
CCT
Arg
>WENV183545827
OOAQ01046112
175904
Bacteroidota
CGG
Pro
>WENV183545126
OOAQ01000494
289031
Bacteroidota
CAT
Met
>WENV183545085
OOAQ01000369
280553
Bacteroidota
TTT
Lys
>WENV183545111
OOAQ01000476
280557
Bacteroidota
CAT
Met
>WENV183545297
OOAQ01001600
20206
Bacteroidota
GGA
Ser
>WENV183544898
OOAQ01000003
483416
Bacteroidota
CTG
Gln
>WENV183545093
OOAQ01000418
398871
Bacteroidota
TTC
Glu
>WENV183545325
OOAQ01001854
56493
Bacteroidota
TGA
Ser
>WENV183545303
OOAQ01001634
56493
Bacteroidota
TGA
Ser
>WENV183545020
OOAQ01000237
56493
Bacteroidota
TGA
Ser
>WENV183544972
OOAQ01000100
175906
Bacteroidota
GTG
His
>WENV183545211
OOAQ01000896
175903
Bacteroidota
GTG
His
>WENV183545381
OOAQ01002477
351598
Bacteroidota
CGG
Pro
>WENV183545838
OOAQ01051222
291612
Bacteroidota
>WENV183545181
OOAQ01000784
118089
Bacteroidota
TAG
Leu
>WENV183545315
OOAQ01001733
280530
Bacteroidota
CCA
Trp
>WENV183545025
OOAQ01000248
178907
Bacteroidota
TCT
Arg
>WENV183545670
OOAQ01014385
172085
Bacteroidota
TAC
Val
>WENV183545342
OOAQ01002056
20449
Bacteroidota
GGA
Ser
>WENV183545043
OOAQ01000285
56072
Bacteroidota
TAA
Leu
>WENV183545441
OOAQ01003543
175886
Bacteroidota
GGC
Ala
>WENV183545287
OOAQ01001553
175902
Bacteroidota
GGC
Ala
>WENV183545244
OOAQ01001097
480404
Bacteroidota
TTG
Gln
>WENV183545464
OOAQ01004221
280451
Bacteroidota
CGT
Thr
>WENV183545034
OOAQ01000269
99847
Bacteroidota
GTA
Tyr
>WENV183545028
OOAQ01000250
99847
Bacteroidota
GTA
Tyr
>WENV183545010
OOAQ01000204
399200
Bacteroidota
CAT
Met
>WENV183544925
OOAQ01000027
399200
Bacteroidota
CAT
Met
>WENV183544948
OOAQ01000068
186874
Bacteroidota
CAT
Met
>WENV183545001
OOAQ01000168
488746
Bacteroidota
CTG
Gln
>WENV183545018
OOAQ01000233
280478
Bacteroidota
GCC
Gly
>WENV183545691
OOAQ01015950
186108
Bacteroidota
GTT
Asn
>WENV183545687
OOAQ01015780
175844
Bacteroidota
GGC
Ala
>WENV183545242
OOAQ01001081
73011
Bacteroidota
CAA
Leu
>WENV183545021
OOAQ01000241
183889
Bacteroidota
GGC
Ala
>WENV183545729
OOAQ01022255
186142
Bacteroidota
GAT
Ile
>WENV183545058
OOAQ01000310
398828
Bacteroidota
CCG
Arg
>WENV183545031
OOAQ01000259
398828
Bacteroidota
CCG
Arg
>WENV183544939
OOAQ01000057
74084
Bacteroidota
CAG
Leu
>WENV183545508
OOAQ01005243
159415
Bacteroidota
TAC
Val
>WENV183545263
OOAQ01001278
480325
Bacteroidota
CTG
Gln
>WENV183545087
OOAQ01000385
69204
Bacteroidota
TGA
Ser
>WENV183544975
OOAQ01000103
69204
Bacteroidota
TGA
Ser
>WENV183545634
OOAQ01011410
484496
Bacteroidota
TTG
Gln
>WENV183545149
OOAQ01000632
27502
Bacteroidota
GGA
Ser
>WENV183544976
OOAQ01000105
27502
Bacteroidota
GGA
Ser
>WENV183545223
OOAQ01000949
285750
Bacteroidota
CCC
Gly
>WENV183545743
OOAQ01023838
373714
Bacteroidota
GCC
Gly
>WENV183545730
OOAQ01022255
186143
Bacteroidota
TGC
Ala
>WENV183545461
OOAQ01004103
365112
Bacteroidota
TTT
Lys
>WENV183545324
OOAQ01001847
365112
Bacteroidota
TTT
Lys
>WENV183545313
OOAQ01001728
365112
Bacteroidota
TTT
Lys
>WENV183545293
OOAQ01001587
365112
Bacteroidota
TTT
Lys
>WENV183545100
OOAQ01000433
365112
Bacteroidota
TTT
Lys
>WENV183545488
OOAQ01004808
398836
Bacteroidota
GCA
Cys
>WENV183545409
OOAQ01003068
398836
Bacteroidota
GCA
Cys
>WENV183545136
OOAQ01000552
398836
Bacteroidota
GCA
Cys
>WENV183545013
OOAQ01000218
398836
Bacteroidota
GCA
Cys
>WENV183545011
OOAQ01000205
398836
Bacteroidota
GCA
Cys
>WENV183545224
OOAQ01000952
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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