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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183549727
OOAZ01009706
179231
Actinomycetota
TAC
Val
>WENV183549607
OOAZ01004529
147806
Actinomycetota
TAA
Leu
>WENV183549733
OOAZ01009965
280498
Actinomycetota
GTT
Asn
>WENV183549929
OOAZ01052279
295964
Actinomycetota
GTT
Asn
>WENV183549601
OOAZ01004217
56083
Actinomycetota
CGA
Ser
>WENV183549598
OOAZ01004124
140768
Actinomycetota
TAG
Leu
>WENV183549749
OOAZ01010947
176075
Actinomycetota
TCT
Arg
>WENV183549870
OOAZ01030419
20208
Actinomycetota
GAG
Leu
>WENV183549615
OOAZ01004706
175837
Actinomycetota
ACG
Arg
>WENV183549630
OOAZ01004950
280549
Actinomycetota
CAC
Val
>WENV183549175
OOAZ01000187
398947
Actinomycetota
CCA
Trp
>WENV183549753
OOAZ01011352
280702
Actinomycetota
GGC
Ala
>WENV183549840
OOAZ01023490
176077
Actinomycetota
CAT
Met
>WENV183549874
OOAZ01033020
176638
Actinomycetota
GGG
Pro
>WENV183549639
OOAZ01005554
280524
Actinomycetota
TGC
Ala
>WENV183549771
OOAZ01012935
150272
Actinomycetota
TAA
Leu
>WENV183549655
OOAZ01006191
117777
Actinomycetota
>WENV183549604
OOAZ01004364
280523
Actinomycetota
GGC
Ala
>WENV183549656
OOAZ01006191
175949
Actinomycetota
CAT
Met
>WENV183549629
OOAZ01004950
418252
Actinomycetota
GAC
Val
>WENV183549623
OOAZ01004914
280496
Actinomycetota
CGT
Thr
>WENV183549724
OOAZ01009431
280450
Actinomycetota
TTT
Lys
>WENV183549597
OOAZ01004124
323758
Actinomycetota
CGT
Thr
>WENV183549633
OOAZ01005096
480329
Actinomycetota
CCC
Gly
>WENV183549560
OOAZ01002929
99865
Actinomycetota
CAG
Leu
>WENV183549708
OOAZ01008459
222475
Actinomycetota
CTT
Lys
>WENV183549637
OOAZ01005461
480319
Actinomycetota
TTG
Gln
>WENV183549660
OOAZ01006358
280499
Actinomycetota
CCT
Arg
>WENV183549572
OOAZ01003079
398853
Actinomycetota
CTG
Gln
>WENV183549652
OOAZ01005908
176642
Actinomycetota
CAA
Leu
>WENV183549780
OOAZ01014172
175843
Actinomycetota
CAA
Leu
>WENV183549707
OOAZ01008422
203883
Actinomycetota
TCT
Arg
>WENV183549616
OOAZ01004748
46642
Actinomycetota
CGA
Ser
>WENV183549654
OOAZ01006004
317680
Actinomycetota
CCG
Arg
>WENV183549571
OOAZ01003079
289788
Actinomycetota
CTC
Glu
>WENV183549798
OOAZ01016715
280470
Actinomycetota
CGT
Thr
>WENV183549826
OOAZ01021061
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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