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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183549533
OOAZ01002368
285360
Bacteroidota
TTT
Lys
>WENV183549407
OOAZ01001074
398829
Bacteroidota
CCT
Arg
>WENV183549489
OOAZ01001724
398829
Bacteroidota
CCT
Arg
>WENV183548980
OOAZ01000001
404226
Bacteroidota
CCT
Arg
>WENV183549509
OOAZ01001998
175904
Bacteroidota
CGG
Pro
>WENV183549527
OOAZ01002249
289031
Bacteroidota
CAT
Met
>WENV183549220
OOAZ01000319
280553
Bacteroidota
TTT
Lys
>WENV183548978
OOAZ01000001
280553
Bacteroidota
TTT
Lys
>WENV183549588
OOAZ01003652
280557
Bacteroidota
CAT
Met
>WENV183549577
OOAZ01003412
280557
Bacteroidota
CAT
Met
>WENV183549369
OOAZ01000885
280557
Bacteroidota
CAT
Met
>WENV183549657
OOAZ01006255
20206
Bacteroidota
GGA
Ser
>WENV183548977
OOAZ01000001
398871
Bacteroidota
TTC
Glu
>WENV183549433
OOAZ01001341
56493
Bacteroidota
TGA
Ser
>WENV183549347
OOAZ01000764
56493
Bacteroidota
TGA
Ser
>WENV183549570
OOAZ01003045
175903
Bacteroidota
GTG
His
>WENV183549182
OOAZ01000199
118089
Bacteroidota
TAG
Leu
>WENV183549151
OOAZ01000165
280530
Bacteroidota
CCA
Trp
>WENV183549014
OOAZ01000026
203954
Bacteroidota
GTC
Asp
>WENV183548989
OOAZ01000005
178907
Bacteroidota
TCT
Arg
>WENV183549218
OOAZ01000315
182267
Bacteroidota
GTT
Asn
>WENV183549159
OOAZ01000168
20449
Bacteroidota
GGA
Ser
>WENV183549722
OOAZ01009263
56072
Bacteroidota
TAA
Leu
>WENV183549463
OOAZ01001509
56072
Bacteroidota
TAA
Leu
>WENV183549420
OOAZ01001164
56072
Bacteroidota
TAA
Leu
>WENV183549143
OOAZ01000153
56072
Bacteroidota
TAA
Leu
>WENV183549449
OOAZ01001454
57807
Bacteroidota
TGA
Ser
>WENV183549298
OOAZ01000528
57807
Bacteroidota
TGA
Ser
>WENV183549117
OOAZ01000124
57807
Bacteroidota
TGA
Ser
>WENV183549054
OOAZ01000062
175886
Bacteroidota
GGC
Ala
>WENV183549267
OOAZ01000479
179697
Bacteroidota
TGT
Thr
>WENV183549867
OOAZ01029400
480404
Bacteroidota
TTG
Gln
>WENV183549214
OOAZ01000287
280451
Bacteroidota
CGT
Thr
>WENV183549342
OOAZ01000752
418894
Bacteroidota
TTC
Glu
>WENV183549314
OOAZ01000590
99847
Bacteroidota
GTA
Tyr
>WENV183549200
OOAZ01000246
99847
Bacteroidota
GTA
Tyr
>WENV183549047
OOAZ01000053
399200
Bacteroidota
CAT
Met
>WENV183548981
OOAZ01000002
399200
Bacteroidota
CAT
Met
>WENV183549185
OOAZ01000202
332896
Bacteroidota
TTT
Lys
>WENV183549154
OOAZ01000166
332896
Bacteroidota
TTT
Lys
>WENV183549082
OOAZ01000079
332896
Bacteroidota
TTT
Lys
>WENV183549021
OOAZ01000030
332896
Bacteroidota
TTT
Lys
>WENV183549027
OOAZ01000034
488746
Bacteroidota
CTG
Gln
>WENV183549263
OOAZ01000467
488746
Bacteroidota
CTG
Gln
>WENV183549189
OOAZ01000225
280478
Bacteroidota
GCC
Gly
>WENV183549028
OOAZ01000034
20766
Bacteroidota
GGA
Ser
>WENV183549512
OOAZ01002027
175844
Bacteroidota
GGC
Ala
>WENV183549496
OOAZ01001870
175844
Bacteroidota
GGC
Ala
>WENV183549010
OOAZ01000024
73011
Bacteroidota
CAA
Leu
>WENV183549180
OOAZ01000198
280515
Bacteroidota
CCA
Trp
>WENV183549530
OOAZ01002274
183889
Bacteroidota
GGC
Ala
>WENV183549201
OOAZ01000252
158068
Bacteroidota
GGG
Pro
>WENV183549280
OOAZ01000493
158068
Bacteroidota
GGG
Pro
>WENV183549920
OOAZ01049795
186142
Bacteroidota
GAT
Ile
>WENV183549036
OOAZ01000043
398828
Bacteroidota
CCG
Arg
>WENV183549495
OOAZ01001826
398828
Bacteroidota
CCG
Arg
>WENV183549160
OOAZ01000168
74084
Bacteroidota
CAG
Leu
>WENV183548988
OOAZ01000004
480325
Bacteroidota
CTG
Gln
>WENV183549594
OOAZ01003927
176192
Bacteroidota
TCT
Arg
>WENV183549523
OOAZ01002205
176192
Bacteroidota
TCT
Arg
>WENV183549457
OOAZ01001501
484496
Bacteroidota
TTG
Gln
>WENV183549397
OOAZ01000986
484496
Bacteroidota
TTG
Gln
>WENV183549360
OOAZ01000842
484496
Bacteroidota
TTG
Gln
>WENV183548990
OOAZ01000005
285750
Bacteroidota
CCC
Gly
>WENV183549921
OOAZ01049795
186143
Bacteroidota
TGC
Ala
>WENV183549538
OOAZ01002470
398836
Bacteroidota
GCA
Cys
>WENV183549438
OOAZ01001378
398836
Bacteroidota
GCA
Cys
>WENV183549374
OOAZ01000909
398836
Bacteroidota
GCA
Cys
>WENV183549128
OOAZ01000137
398836
Bacteroidota
GCA
Cys
>WENV183549124
OOAZ01000136
398836
Bacteroidota
GCA
Cys
>WENV183549042
OOAZ01000050
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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