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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183550153
OOBB01000325
400161
Bacteroidota
GGT
Thr
>WENV183550171
OOBB01000377
156422
Bacteroidota
TAC
Val
>WENV183550371
OOBB01002648
156422
Bacteroidota
TAC
Val
>WENV183550210
OOBB01000616
280557
Bacteroidota
CAT
Met
>WENV183550127
OOBB01000252
201819
Bacteroidota
CAT
Met
>WENV183550076
OOBB01000159
118221
Bacteroidota
CAA
Leu
>WENV183550113
OOBB01000224
118221
Bacteroidota
CAA
Leu
>WENV183550138
OOBB01000290
118221
Bacteroidota
CAA
Leu
>WENV183550391
OOBB01003270
56493
Bacteroidota
TGA
Ser
>WENV183550288
OOBB01001077
175903
Bacteroidota
GTG
His
>WENV183550621
OOBB01034510
156068
Bacteroidota
TAC
Val
>WENV183550110
OOBB01000219
56385
Bacteroidota
TGA
Ser
>WENV183550109
OOBB01000219
56385
Bacteroidota
TGA
Ser
>WENV183550080
OOBB01000169
56385
Bacteroidota
TGA
Ser
>WENV183549995
OOBB01000032
56385
Bacteroidota
TGA
Ser
>WENV183550279
OOBB01001027
57645
Bacteroidota
TGA
Ser
>WENV183550096
OOBB01000193
57645
Bacteroidota
TGA
Ser
>WENV183550007
OOBB01000047
182267
Bacteroidota
GTT
Asn
>WENV183550006
OOBB01000047
182267
Bacteroidota
GTT
Asn
>WENV183550005
OOBB01000047
182267
Bacteroidota
GTT
Asn
>WENV183550205
OOBB01000603
312035
Bacteroidota
CCA
Trp
>WENV183550123
OOBB01000247
56072
Bacteroidota
TAA
Leu
>WENV183550092
OOBB01000180
57807
Bacteroidota
TGA
Ser
>WENV183550157
OOBB01000339
175944
Bacteroidota
CAT
Met
>WENV183550161
OOBB01000350
404109
Bacteroidota
CTC
Glu
>WENV183550160
OOBB01000350
404109
Bacteroidota
CTC
Glu
>WENV183550094
OOBB01000184
404109
Bacteroidota
CTC
Glu
>WENV183550251
OOBB01000796
46648
Bacteroidota
TAA
Leu
>WENV183550137
OOBB01000284
46648
Bacteroidota
TAA
Leu
>WENV183550062
OOBB01000133
46648
Bacteroidota
TAA
Leu
>WENV183549977
OOBB01000024
46648
Bacteroidota
TAA
Leu
>WENV183550199
OOBB01000581
118432
Bacteroidota
CAG
Leu
>WENV183550357
OOBB01002239
187400
Bacteroidota
GTT
Asn
>WENV183550356
OOBB01002239
187400
Bacteroidota
GTT
Asn
>WENV183550125
OOBB01000250
187400
Bacteroidota
GTT
Asn
>WENV183550343
OOBB01001697
187814
Bacteroidota
GTC
Asp
>WENV183550267
OOBB01000906
187814
Bacteroidota
GTC
Asp
>WENV183550095
OOBB01000184
187814
Bacteroidota
GTC
Asp
>WENV183550057
OOBB01000122
187814
Bacteroidota
GTC
Asp
>WENV183550056
OOBB01000122
187814
Bacteroidota
GTC
Asp
>WENV183550055
OOBB01000122
187814
Bacteroidota
GTC
Asp
>WENV183550273
OOBB01000931
158068
Bacteroidota
GGG
Pro
>WENV183550167
OOBB01000367
158068
Bacteroidota
GGG
Pro
>WENV183550121
OOBB01000235
158068
Bacteroidota
GGG
Pro
>WENV183550024
OOBB01000059
191205
Bacteroidota
TGG
Pro
>WENV183550023
OOBB01000059
191205
Bacteroidota
TGG
Pro
>WENV183550101
OOBB01000198
481328
Bacteroidota
TTG
Gln
>WENV183550221
OOBB01000641
491385
Bacteroidota
TTG
Gln
>WENV183550025
OOBB01000066
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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