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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552991
OOBK01000173
117741
Bacteroidota
TAG
Leu
>WENV183553062
OOBK01000331
398829
Bacteroidota
CCT
Arg
>WENV183552995
OOBK01000188
175838
Bacteroidota
GTT
Asn
>WENV183553603
OOBK01018517
175904
Bacteroidota
CGG
Pro
>WENV183553010
OOBK01000212
400161
Bacteroidota
GGT
Thr
>WENV183553547
OOBK01011138
280557
Bacteroidota
CAT
Met
>WENV183552933
OOBK01000051
20206
Bacteroidota
GGA
Ser
>WENV183553214
OOBK01001349
201819
Bacteroidota
CAT
Met
>WENV183553263
OOBK01001599
56493
Bacteroidota
TGA
Ser
>WENV183553382
OOBK01003502
175903
Bacteroidota
GTG
His
>WENV183553057
OOBK01000319
351598
Bacteroidota
CGG
Pro
>WENV183553118
OOBK01000616
182267
Bacteroidota
GTT
Asn
>WENV183553119
OOBK01000616
182267
Bacteroidota
GTT
Asn
>WENV183553041
OOBK01000272
56072
Bacteroidota
TAA
Leu
>WENV183553027
OOBK01000248
57807
Bacteroidota
TGA
Ser
>WENV183553098
OOBK01000499
175902
Bacteroidota
GGC
Ala
>WENV183553604
OOBK01018595
480404
Bacteroidota
TTG
Gln
>WENV183552959
OOBK01000093
280451
Bacteroidota
CGT
Thr
>WENV183552980
OOBK01000143
99847
Bacteroidota
GTA
Tyr
>WENV183553306
OOBK01002023
404109
Bacteroidota
CTC
Glu
>WENV183553305
OOBK01002023
404109
Bacteroidota
CTC
Glu
>WENV183553163
OOBK01000829
46648
Bacteroidota
TAA
Leu
>WENV183552932
OOBK01000051
488746
Bacteroidota
CTG
Gln
>WENV183552931
OOBK01000049
398828
Bacteroidota
CCG
Arg
>WENV183553226
OOBK01001428
191205
Bacteroidota
TGG
Pro
>WENV183552952
OOBK01000085
191205
Bacteroidota
TGG
Pro
>WENV183553015
OOBK01000220
491385
Bacteroidota
TTG
Gln
>WENV183553284
OOBK01001767
484496
Bacteroidota
TTG
Gln
>WENV183553650
OOBK01028432
285750
Bacteroidota
CCC
Gly
>WENV183552962
OOBK01000102
365112
Bacteroidota
TTT
Lys
>WENV183553021
OOBK01000230
365112
Bacteroidota
TTT
Lys
>WENV183553426
OOBK01004392
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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