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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183574468
OOCH01015743
295385
Bacteroidota
CCA
Trp
>WENV183573529
OOCH01000189
117741
Bacteroidota
TAG
Leu
>WENV183573743
OOCH01000623
398829
Bacteroidota
CCT
Arg
>WENV183573455
OOCH01000092
175838
Bacteroidota
GTT
Asn
>WENV183573469
OOCH01000104
404226
Bacteroidota
CCT
Arg
>WENV183573487
OOCH01000120
400161
Bacteroidota
GGT
Thr
>WENV183573862
OOCH01001100
289031
Bacteroidota
CAT
Met
>WENV183574244
OOCH01004797
280557
Bacteroidota
CAT
Met
>WENV183573757
OOCH01000652
280557
Bacteroidota
CAT
Met
>WENV183573659
OOCH01000382
280557
Bacteroidota
CAT
Met
>WENV183573610
OOCH01000287
20206
Bacteroidota
GGA
Ser
>WENV183573505
OOCH01000143
483416
Bacteroidota
CTG
Gln
>WENV183573636
OOCH01000342
201819
Bacteroidota
CAT
Met
>WENV183573651
OOCH01000372
118221
Bacteroidota
CAA
Leu
>WENV183573986
OOCH01001815
56493
Bacteroidota
TGA
Ser
>WENV183573520
OOCH01000173
351598
Bacteroidota
CGG
Pro
>WENV183574214
OOCH01004011
118089
Bacteroidota
TAG
Leu
>WENV183573595
OOCH01000273
405877
Bacteroidota
GGT
Thr
>WENV183573619
OOCH01000312
56385
Bacteroidota
TGA
Ser
>WENV183574046
OOCH01002147
182267
Bacteroidota
GTT
Asn
>WENV183573810
OOCH01000883
182267
Bacteroidota
GTT
Asn
>WENV183573383
OOCH01000017
182267
Bacteroidota
GTT
Asn
>WENV183574714
OOCH01060468
20449
Bacteroidota
GGA
Ser
>WENV183573488
OOCH01000120
312035
Bacteroidota
CCA
Trp
>WENV183574215
OOCH01004037
242241
Bacteroidota
GTC
Asp
>WENV183573867
OOCH01001125
242241
Bacteroidota
GTC
Asp
>WENV183573715
OOCH01000544
21127
Bacteroidota
GGA
Ser
>WENV183573809
OOCH01000883
56072
Bacteroidota
TAA
Leu
>WENV183573481
OOCH01000112
56072
Bacteroidota
TAA
Leu
>WENV183573385
OOCH01000017
56072
Bacteroidota
TAA
Leu
>WENV183573389
OOCH01000023
57807
Bacteroidota
TGA
Ser
>WENV183574260
OOCH01005391
175886
Bacteroidota
GGC
Ala
>WENV183573883
OOCH01001187
175902
Bacteroidota
GGC
Ala
>WENV183573916
OOCH01001364
179697
Bacteroidota
TGT
Thr
>WENV183573426
OOCH01000064
280451
Bacteroidota
CGT
Thr
>WENV183574005
OOCH01001945
418894
Bacteroidota
TTC
Glu
>WENV183573562
OOCH01000223
99847
Bacteroidota
GTA
Tyr
>WENV183573885
OOCH01001198
404109
Bacteroidota
CTC
Glu
>WENV183574740
OOCH01072595
186874
Bacteroidota
CAT
Met
>WENV183573923
OOCH01001376
189252
Bacteroidota
GGC
Ala
>WENV183573589
OOCH01000262
46648
Bacteroidota
TAA
Leu
>WENV183573609
OOCH01000287
488746
Bacteroidota
CTG
Gln
>WENV183574193
OOCH01003639
280515
Bacteroidota
CCA
Trp
>WENV183574683
OOCH01052360
183889
Bacteroidota
GGC
Ala
>WENV183573572
OOCH01000238
158068
Bacteroidota
GGG
Pro
>WENV183573632
OOCH01000333
158068
Bacteroidota
GGG
Pro
>WENV183573693
OOCH01000498
398828
Bacteroidota
CCG
Arg
>WENV183574395
OOCH01010868
159415
Bacteroidota
TAC
Val
>WENV183573812
OOCH01000886
140771
Bacteroidota
>WENV183573507
OOCH01000144
481328
Bacteroidota
TTG
Gln
>WENV183573631
OOCH01000333
280446
Bacteroidota
TTT
Lys
>WENV183573663
OOCH01000394
280446
Bacteroidota
TTT
Lys
>WENV183573381
OOCH01000013
484496
Bacteroidota
TTG
Gln
>WENV183574454
OOCH01014822
285750
Bacteroidota
CCC
Gly
>WENV183573633
OOCH01000334
365112
Bacteroidota
TTT
Lys
>WENV183574223
OOCH01004279
398836
Bacteroidota
GCA
Cys
>WENV183573451
OOCH01000090
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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