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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576974
OOCJ01003737
510477
Bacillota
TCC
Gly
>WENV183576547
OOCJ01000230
99852
Bacillota
GTA
Tyr
>WENV183576722
OOCJ01000771
343590
Bacillota
GCC
Gly
>WENV183577009
OOCJ01005245
343590
Bacillota
GCC
Gly
>WENV183577018
OOCJ01005385
343590
Bacillota
GCC
Gly
>WENV183577019
OOCJ01005385
343590
Bacillota
GCC
Gly
>WENV183576681
OOCJ01000614
349107
Bacillota
GCC
Gly
>WENV183576824
OOCJ01001598
349107
Bacillota
GCC
Gly
>WENV183576826
OOCJ01001598
349107
Bacillota
GCC
Gly
>WENV183576827
OOCJ01001598
405363
Bacillota
GCA
Cys
>WENV183576878
OOCJ01002067
281077
Bacillota
GTT
Asn
>WENV183576823
OOCJ01001598
280428
Bacillota
GAA
Phe
>WENV183576680
OOCJ01000614
280428
Bacillota
GAA
Phe
>WENV183576452
OOCJ01000085
229015
Bacillota
GTG
His
>WENV183576461
OOCJ01000089
179917
Bacillota
CAT
Met
>WENV183576748
OOCJ01001001
284746
Bacillota
CTG
Gln
>WENV183576739
OOCJ01000949
175842
Bacillota
CAC
Val
>WENV183576662
OOCJ01000537
291629
Bacillota
CCA
Trp
>WENV183577165
OOCJ01018953
194260
Bacillota
GAT
Ile
>WENV183577029
OOCJ01005857
190476
Bacillota
CAT
Met
>WENV183576708
OOCJ01000709
280447
Bacillota
GAC
Val
>WENV183576515
OOCJ01000166
280447
Bacillota
GAC
Val
>WENV183576810
OOCJ01001482
5692
Bacillota
GCT
Ser
>WENV183576730
OOCJ01000856
312274
Bacillota
GGC
Ala
>WENV183576764
OOCJ01001069
359682
Bacillota
TAC
Val
>WENV183576719
OOCJ01000759
284723
Bacillota
TAC
Val
>WENV183576466
OOCJ01000095
73009
Bacillota
CAG
Leu
>WENV183576389
OOCJ01000026
73009
Bacillota
CAG
Leu
>WENV183576666
OOCJ01000540
291581
Bacillota
CGG
Pro
>WENV183576469
OOCJ01000099
175859
Bacillota
TCT
Arg
>WENV183576808
OOCJ01001477
398835
Bacillota
GCC
Gly
>WENV183577270
OOCJ01042491
175847
Bacillota
GTC
Asp
>WENV183576554
OOCJ01000237
175831
Bacillota
ACG
Arg
>WENV183576863
OOCJ01001983
332181
Bacillota
TGT
Thr
>WENV183576451
OOCJ01000085
179810
Bacillota
TCT
Arg
>WENV183576576
OOCJ01000280
284627
Bacillota
GAA
Phe
>WENV183576543
OOCJ01000219
284627
Bacillota
GAA
Phe
>WENV183576948
OOCJ01003344
291634
Bacillota
GAA
Phe
>WENV183576684
OOCJ01000623
346451
Bacillota
TTT
Lys
>WENV183576507
OOCJ01000153
27216
Bacillota
GCT
Ser
>WENV183576665
OOCJ01000540
480322
Bacillota
CTG
Gln
>WENV183576410
OOCJ01000043
480322
Bacillota
CTG
Gln
>WENV183576847
OOCJ01001898
187364
Bacillota
CAT
Met
>WENV183576754
OOCJ01001040
175868
Bacillota
GTT
Asn
>WENV183576535
OOCJ01000200
175868
Bacillota
GTT
Asn
>WENV183576759
OOCJ01001069
284744
Bacillota
TTT
Lys
>WENV183576534
OOCJ01000200
398854
Bacillota
CTC
Glu
>WENV183576773
OOCJ01001197
291576
Bacillota
CCC
Gly
>WENV183577202
OOCJ01023224
287280
Bacillota
TGT
Thr
>WENV183576664
OOCJ01000540
480324
Bacillota
TTG
Gln
>WENV183577209
OOCJ01023496
400963
Bacillota
GTT
Asn
>WENV183577219
OOCJ01024959
497729
Bacillota
CCA
Trp
>WENV183577148
OOCJ01015955
323864
Bacillota
TGC
Ala
>WENV183576762
OOCJ01001069
179935
Bacillota
GTC
Asp
>WENV183577154
OOCJ01016434
186051
Bacillota
GAT
Ile
>WENV183577250
OOCJ01035867
398857
Bacillota
TTC
Glu
>WENV183576553
OOCJ01000236
280444
Bacillota
GGT
Thr
>WENV183576552
OOCJ01000236
280444
Bacillota
GGT
Thr
>WENV183576713
OOCJ01000739
483485
Bacillota
CCC
Gly
>WENV183577293
OOCJ01049639
291597
Bacillota
TGC
Ala
>WENV183577205
OOCJ01023224
342104
Bacillota
TAC
Val
>WENV183577166
OOCJ01019243
179755
Bacillota
CCG
Arg
>WENV183577162
OOCJ01018952
179755
Bacillota
CCG
Arg
>WENV183577226
OOCJ01026577
401111
Bacillota
TTC
Glu
>WENV183576760
OOCJ01001069
401111
Bacillota
TTC
Glu
>WENV183576702
OOCJ01000694
46835
Bacillota
TAA
Leu
>WENV183576763
OOCJ01001069
284742
Bacillota
GAA
Phe
>WENV183577030
OOCJ01005857
398832
Bacillota
TTC
Glu
>WENV183576953
OOCJ01003435
118669
Bacillota
GTA
Tyr
>WENV183576541
OOCJ01000219
118669
Bacillota
GTA
Tyr
>WENV183577142
OOCJ01014527
52748
Bacillota
TGA
Ser
>WENV183576866
OOCJ01001983
289123
Bacillota
GGT
Thr
>WENV183576724
OOCJ01000790
406186
Bacillota
CTC
Glu
>WENV183577257
OOCJ01037660
285756
Bacillota
GCC
Gly
>WENV183576899
OOCJ01002415
285756
Bacillota
GCC
Gly
>WENV183576510
OOCJ01000156
398833
Bacillota
TGT
Thr
>WENV183576825
OOCJ01001598
175849
Bacillota
GTC
Asp
>WENV183576551
OOCJ01000236
175849
Bacillota
GTC
Asp
>WENV183577171
OOCJ01020037
280486
Bacillota
TGC
Ala
>WENV183577120
OOCJ01012824
280486
Bacillota
TGC
Ala
>WENV183576949
OOCJ01003344
405393
Bacillota
GCC
Gly
>WENV183576729
OOCJ01000843
405393
Bacillota
GCC
Gly
>WENV183576661
OOCJ01000537
405393
Bacillota
GCC
Gly
>WENV183576809
OOCJ01001482
56074
Bacillota
TGA
Ser
>WENV183576626
OOCJ01000390
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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