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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183597404
OODF01000375
99852
Bacillota
GTA
Tyr
>WENV183597696
OODF01002510
99852
Bacillota
GTA
Tyr
>WENV183597882
OODF01009841
99852
Bacillota
GTA
Tyr
>WENV183597955
OODF01016998
280500
Bacillota
TGC
Ala
>WENV183597267
OODF01000118
349107
Bacillota
GCC
Gly
>WENV183597797
OODF01005796
349107
Bacillota
GCC
Gly
>WENV183597914
OODF01012215
349107
Bacillota
GCC
Gly
>WENV183597708
OODF01002684
280428
Bacillota
GAA
Phe
>WENV183597730
OODF01003172
280428
Bacillota
GAA
Phe
>WENV183597796
OODF01005796
280428
Bacillota
GAA
Phe
>WENV183597913
OODF01012215
280428
Bacillota
GAA
Phe
>WENV183597993
OODF01026853
280428
Bacillota
GAA
Phe
>WENV183598025
OODF01037847
280428
Bacillota
GAA
Phe
>WENV183597369
OODF01000283
175842
Bacillota
CAC
Val
>WENV183597642
OODF01001749
175842
Bacillota
CAC
Val
>WENV183597847
OODF01007793
175842
Bacillota
CAC
Val
>WENV183597863
OODF01008563
175842
Bacillota
CAC
Val
>WENV183597539
OODF01000837
291629
Bacillota
CCA
Trp
>WENV183597871
OODF01008958
348419
Bacillota
GTT
Asn
>WENV183598031
OODF01039562
184497
Bacillota
GGG
Pro
>WENV183597329
OODF01000217
190476
Bacillota
CAT
Met
>WENV183597249
OODF01000095
190476
Bacillota
CAT
Met
>WENV183598037
OODF01042058
280447
Bacillota
GAC
Val
>WENV183598007
OODF01031755
280447
Bacillota
GAC
Val
>WENV183598002
OODF01028922
280447
Bacillota
GAC
Val
>WENV183597929
OODF01013998
280447
Bacillota
GAC
Val
>WENV183597874
OODF01009027
280447
Bacillota
GAC
Val
>WENV183597808
OODF01006266
280447
Bacillota
GAC
Val
>WENV183597652
OODF01001815
280447
Bacillota
GAC
Val
>WENV183597508
OODF01000678
280447
Bacillota
GAC
Val
>WENV183597376
OODF01000307
280447
Bacillota
GAC
Val
>WENV183597368
OODF01000283
280447
Bacillota
GAC
Val
>WENV183597386
OODF01000331
5692
Bacillota
GCT
Ser
>WENV183597246
OODF01000089
5692
Bacillota
GCT
Ser
>WENV183597868
OODF01008650
186123
Bacillota
GTC
Asp
>WENV183597537
OODF01000837
186123
Bacillota
GTC
Asp
>WENV183597517
OODF01000738
186123
Bacillota
GTC
Asp
>WENV183597984
OODF01023158
175825
Bacillota
GAT
Ile
>WENV183597990
OODF01025180
73009
Bacillota
CAG
Leu
>WENV183597968
OODF01019054
73009
Bacillota
CAG
Leu
>WENV183597937
OODF01014850
73009
Bacillota
CAG
Leu
>WENV183597632
OODF01001643
73009
Bacillota
CAG
Leu
>WENV183597583
OODF01001070
73009
Bacillota
CAG
Leu
>WENV183597456
OODF01000511
73009
Bacillota
CAG
Leu
>WENV183597777
OODF01005371
291581
Bacillota
CGG
Pro
>WENV183597582
OODF01001070
291581
Bacillota
CGG
Pro
>WENV183597442
OODF01000473
291581
Bacillota
CGG
Pro
>WENV183597321
OODF01000203
291581
Bacillota
CGG
Pro
>WENV183597750
OODF01003857
175859
Bacillota
TCT
Arg
>WENV183597558
OODF01000898
175859
Bacillota
TCT
Arg
>WENV183597555
OODF01000894
175859
Bacillota
TCT
Arg
>WENV183597448
OODF01000488
175859
Bacillota
TCT
Arg
>WENV183597983
OODF01023158
280436
Bacillota
TGC
Ala
>WENV183597251
OODF01000095
175831
Bacillota
ACG
Arg
>WENV183597530
OODF01000794
175831
Bacillota
ACG
Arg
>WENV183597672
OODF01002098
332181
Bacillota
TGT
Thr
>WENV183597869
OODF01008650
291634
Bacillota
GAA
Phe
>WENV183597518
OODF01000738
291634
Bacillota
GAA
Phe
>WENV183597897
OODF01010998
294020
Bacillota
TAC
Val
>WENV183597660
OODF01001905
346451
Bacillota
TTT
Lys
>WENV183597318
OODF01000200
346451
Bacillota
TTT
Lys
>WENV183597836
OODF01007206
480322
Bacillota
CTG
Gln
>WENV183597608
OODF01001282
480322
Bacillota
CTG
Gln
>WENV183597581
OODF01001070
480322
Bacillota
CTG
Gln
>WENV183597531
OODF01000807
480322
Bacillota
CTG
Gln
>WENV183597441
OODF01000473
480322
Bacillota
CTG
Gln
>WENV183597320
OODF01000203
480322
Bacillota
CTG
Gln
>WENV183597317
OODF01000197
480322
Bacillota
CTG
Gln
>WENV183597243
OODF01000083
480322
Bacillota
CTG
Gln
>WENV183597854
OODF01008058
401685
Bacillota
TTG
Gln
>WENV183597860
OODF01008357
175868
Bacillota
GTT
Asn
>WENV183597739
OODF01003348
175868
Bacillota
GTT
Asn
>WENV183597729
OODF01003119
175868
Bacillota
GTT
Asn
>WENV183597710
OODF01002728
175868
Bacillota
GTT
Asn
>WENV183597679
OODF01002148
175868
Bacillota
GTT
Asn
>WENV183597438
OODF01000462
175868
Bacillota
GTT
Asn
>WENV183597308
OODF01000179
175868
Bacillota
GTT
Asn
>WENV183597269
OODF01000118
175868
Bacillota
GTT
Asn
>WENV183597248
OODF01000089
175868
Bacillota
GTT
Asn
>WENV183597232
OODF01000077
175868
Bacillota
GTT
Asn
>WENV183597891
OODF01010587
322848
Bacillota
CTT
Lys
>WENV183597436
OODF01000462
322848
Bacillota
CTT
Lys
>WENV183597859
OODF01008357
398854
Bacillota
CTC
Glu
>WENV183597728
OODF01003119
398854
Bacillota
CTC
Glu
>WENV183597709
OODF01002728
398854
Bacillota
CTC
Glu
>WENV183597437
OODF01000462
398854
Bacillota
CTC
Glu
>WENV183597307
OODF01000179
398854
Bacillota
CTC
Glu
>WENV183597247
OODF01000089
398854
Bacillota
CTC
Glu
>WENV183597793
OODF01005714
291576
Bacillota
CCC
Gly
>WENV183597755
OODF01003965
291576
Bacillota
CCC
Gly
>WENV183597383
OODF01000328
291576
Bacillota
CCC
Gly
>WENV183597244
OODF01000087
291576
Bacillota
CCC
Gly
>WENV183597809
OODF01006323
480324
Bacillota
TTG
Gln
>WENV183597754
OODF01003918
480324
Bacillota
TTG
Gln
>WENV183597604
OODF01001251
480324
Bacillota
TTG
Gln
>WENV183597443
OODF01000473
480324
Bacillota
TTG
Gln
>WENV183597794
OODF01005751
497729
Bacillota
CCA
Trp
>WENV183597967
OODF01018693
292374
Bacillota
TGC
Ala
>WENV183598001
OODF01028636
186051
Bacillota
GAT
Ile
>WENV183597996
OODF01027875
398857
Bacillota
TTC
Glu
>WENV183597872
OODF01008958
398857
Bacillota
TTC
Glu
>WENV183598006
OODF01031442
280444
Bacillota
GGT
Thr
>WENV183597876
OODF01009112
280444
Bacillota
GGT
Thr
>WENV183597527
OODF01000763
280444
Bacillota
GGT
Thr
>WENV183597524
OODF01000763
280444
Bacillota
GGT
Thr
>WENV183597514
OODF01000702
280444
Bacillota
GGT
Thr
>WENV183597512
OODF01000702
280444
Bacillota
GGT
Thr
>WENV183597342
OODF01000253
280444
Bacillota
GGT
Thr
>WENV183597340
OODF01000253
280444
Bacillota
GGT
Thr
>WENV183598029
OODF01039064
291597
Bacillota
TGC
Ala
>WENV183597920
OODF01012624
179755
Bacillota
CCG
Arg
>WENV183597757
OODF01004077
179755
Bacillota
CCG
Arg
>WENV183597734
OODF01003218
179755
Bacillota
CCG
Arg
>WENV183597718
OODF01002878
179755
Bacillota
CCG
Arg
>WENV183597801
OODF01005991
58120
Bacillota
AAG
Leu
>WENV183597775
OODF01005230
46835
Bacillota
TAA
Leu
>WENV183597842
OODF01007467
398832
Bacillota
TTC
Glu
>WENV183597330
OODF01000217
398832
Bacillota
TTC
Glu
>WENV183597250
OODF01000095
398832
Bacillota
TTC
Glu
>WENV183597974
OODF01021605
332651
Bacillota
GTT
Asn
>WENV183597966
OODF01018693
201856
Bacillota
GAT
Ile
>WENV183597675
OODF01002098
289123
Bacillota
GGT
Thr
>WENV183597853
OODF01008058
175857
Bacillota
GTG
His
>WENV183598009
OODF01032442
398833
Bacillota
TGT
Thr
>WENV183597639
OODF01001729
398833
Bacillota
TGT
Thr
>WENV183597460
OODF01000533
398833
Bacillota
TGT
Thr
>WENV183597293
OODF01000154
398833
Bacillota
TGT
Thr
>WENV183597526
OODF01000763
175849
Bacillota
GTC
Asp
>WENV183597511
OODF01000702
175849
Bacillota
GTC
Asp
>WENV183597341
OODF01000253
175849
Bacillota
GTC
Asp
>WENV183597925
OODF01013249
280486
Bacillota
TGC
Ala
>WENV183597670
OODF01002072
405393
Bacillota
GCC
Gly
>WENV183597538
OODF01000837
405393
Bacillota
GCC
Gly
>WENV183597519
OODF01000738
405393
Bacillota
GCC
Gly
>WENV183597385
OODF01000331
56074
Bacillota
TGA
Ser
>WENV183597245
OODF01000089
56074
Bacillota
TGA
Ser
>WENV183597970
OODF01020021
280473
Bacillota
TGG
Pro
>WENV183597862
OODF01008480
280473
Bacillota
TGG
Pro
>WENV183597637
OODF01001712
280473
Bacillota
TGG
Pro
>WENV183597336
OODF01000242
280473
Bacillota
TGG
Pro
>WENV183597322
OODF01000203
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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