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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183603745
OODL01000173
295385
Bacteroidota
CCA
Trp
>WENV183603568
OODL01000004
285360
Bacteroidota
TTT
Lys
>WENV183603600
OODL01000016
285360
Bacteroidota
TTT
Lys
>WENV183604087
OODL01001095
117741
Bacteroidota
TAG
Leu
>WENV183603720
OODL01000134
398829
Bacteroidota
CCT
Arg
>WENV183603770
OODL01000201
398829
Bacteroidota
CCT
Arg
>WENV183604092
OODL01001101
404226
Bacteroidota
CCT
Arg
>WENV183604085
OODL01001093
175904
Bacteroidota
CGG
Pro
>WENV183604168
OODL01001441
289031
Bacteroidota
CAT
Met
>WENV183604014
OODL01000840
289031
Bacteroidota
CAT
Met
>WENV183603562
OODL01000003
156422
Bacteroidota
TAC
Val
>WENV183603835
OODL01000305
280557
Bacteroidota
CAT
Met
>WENV183603803
OODL01000255
280557
Bacteroidota
CAT
Met
>WENV183603855
OODL01000350
20492
Bacteroidota
GGA
Ser
>WENV183603560
OODL01000002
20492
Bacteroidota
GGA
Ser
>WENV183603811
OODL01000268
20206
Bacteroidota
GGA
Ser
>WENV183604175
OODL01001492
483416
Bacteroidota
CTG
Gln
>WENV183604091
OODL01001101
398871
Bacteroidota
TTC
Glu
>WENV183603857
OODL01000360
175906
Bacteroidota
GTG
His
>WENV183603819
OODL01000279
175903
Bacteroidota
GTG
His
>WENV183604560
OODL01010923
291612
Bacteroidota
>WENV183603636
OODL01000039
156068
Bacteroidota
TAC
Val
>WENV183604116
OODL01001209
118089
Bacteroidota
TAG
Leu
>WENV183603841
OODL01000313
156406
Bacteroidota
TAC
Val
>WENV183604206
OODL01001639
280530
Bacteroidota
CCA
Trp
>WENV183604132
OODL01001278
178907
Bacteroidota
TCT
Arg
>WENV183604419
OODL01004787
29791
Bacteroidota
GCT
Ser
>WENV183604209
OODL01001661
182267
Bacteroidota
GTT
Asn
>WENV183604208
OODL01001661
182267
Bacteroidota
GTT
Asn
>WENV183604207
OODL01001661
182267
Bacteroidota
GTT
Asn
>WENV183603808
OODL01000263
20449
Bacteroidota
GGA
Ser
>WENV183604051
OODL01000945
56072
Bacteroidota
TAA
Leu
>WENV183603839
OODL01000307
56072
Bacteroidota
TAA
Leu
>WENV183604089
OODL01001098
57807
Bacteroidota
TGA
Ser
>WENV183604061
OODL01000984
57807
Bacteroidota
TGA
Ser
>WENV183604027
OODL01000863
57807
Bacteroidota
TGA
Ser
>WENV183603777
OODL01000211
57807
Bacteroidota
TGA
Ser
>WENV183603806
OODL01000262
175886
Bacteroidota
GGC
Ala
>WENV183603628
OODL01000032
175902
Bacteroidota
GGC
Ala
>WENV183603858
OODL01000367
179697
Bacteroidota
TGT
Thr
>WENV183603794
OODL01000241
480404
Bacteroidota
TTG
Gln
>WENV183604029
OODL01000880
480404
Bacteroidota
TTG
Gln
>WENV183603735
OODL01000161
280451
Bacteroidota
CGT
Thr
>WENV183603724
OODL01000140
99847
Bacteroidota
GTA
Tyr
>WENV183603747
OODL01000181
99847
Bacteroidota
GTA
Tyr
>WENV183603926
OODL01000535
99847
Bacteroidota
GTA
Tyr
>WENV183604018
OODL01000848
399200
Bacteroidota
CAT
Met
>WENV183603847
OODL01000330
399200
Bacteroidota
CAT
Met
>WENV183604212
OODL01001668
399200
Bacteroidota
CAT
Met
>WENV183604505
OODL01007681
186874
Bacteroidota
CAT
Met
>WENV183603876
OODL01000394
186874
Bacteroidota
CAT
Met
>WENV183604619
OODL01017193
186108
Bacteroidota
GTT
Asn
>WENV183603663
OODL01000056
187400
Bacteroidota
GTT
Asn
>WENV183604067
OODL01001023
175844
Bacteroidota
GGC
Ala
>WENV183603706
OODL01000113
73011
Bacteroidota
CAA
Leu
>WENV183603939
OODL01000562
280515
Bacteroidota
CCA
Trp
>WENV183604222
OODL01001772
183889
Bacteroidota
GGC
Ala
>WENV183604435
OODL01005411
480318
Bacteroidota
CTG
Gln
>WENV183604677
OODL01029614
186142
Bacteroidota
GAT
Ile
>WENV183604128
OODL01001250
398828
Bacteroidota
CCG
Arg
>WENV183603817
OODL01000272
74084
Bacteroidota
CAG
Leu
>WENV183604693
OODL01032673
480325
Bacteroidota
CTG
Gln
>WENV183603994
OODL01000757
176192
Bacteroidota
TCT
Arg
>WENV183603804
OODL01000256
176192
Bacteroidota
TCT
Arg
>WENV183604063
OODL01000986
280446
Bacteroidota
TTT
Lys
>WENV183603949
OODL01000595
280446
Bacteroidota
TTT
Lys
>WENV183604264
OODL01002079
285750
Bacteroidota
CCC
Gly
>WENV183604678
OODL01029614
186143
Bacteroidota
TGC
Ala
>WENV183604260
OODL01002050
398836
Bacteroidota
GCA
Cys
>WENV183604213
OODL01001672
398836
Bacteroidota
GCA
Cys
>WENV183603850
OODL01000333
398836
Bacteroidota
GCA
Cys
>WENV183603763
OODL01000192
398836
Bacteroidota
GCA
Cys
>WENV183603749
OODL01000184
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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