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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619509
OOFQ01012011
190614
Alphaproteobacteria
TGG
Pro
>WENV183619413
OOFQ01004444
186414
Alphaproteobacteria
CAT
Met
>WENV183619794
OOFQ01049653
121655
Alphaproteobacteria
TAG
Leu
>WENV183619381
OOFQ01003029
29841
Alphaproteobacteria
GGA
Ser
>WENV183619389
OOFQ01003360
140876
Alphaproteobacteria
>WENV183619497
OOFQ01010314
178725
Alphaproteobacteria
GTG
His
>WENV183619323
OOFQ01001150
405688
Alphaproteobacteria
GTT
Asn
>WENV183619443
OOFQ01006915
398994
Alphaproteobacteria
GTT
Asn
>WENV183619283
OOFQ01000596
281676
Alphaproteobacteria
TAC
Val
>WENV183619757
OOFQ01044713
413432
Alphaproteobacteria
GGT
Thr
>WENV183619606
OOFQ01023796
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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