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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619316
OOFQ01001007
402532
Bacteroidota
GCC
Gly
>WENV183619317
OOFQ01001007
73133
Bacteroidota
TAA
Leu
>WENV183619462
OOFQ01008342
402390
Bacteroidota
TTC
Glu
>WENV183619676
OOFQ01030703
402390
Bacteroidota
TTC
Glu
>WENV183619279
OOFQ01000564
288475
Bacteroidota
GCC
Gly
>WENV183619760
OOFQ01045239
120026
Bacteroidota
GTA
Tyr
>WENV183619832
OOFQ01058978
120026
Bacteroidota
GTA
Tyr
>WENV183619709
OOFQ01035658
156605
Bacteroidota
GAC
Val
>WENV183619761
OOFQ01045239
281336
Bacteroidota
TCC
Gly
>WENV183619643
OOFQ01026584
155786
Bacteroidota
TGG
Pro
>WENV183619408
OOFQ01004269
155786
Bacteroidota
TGG
Pro
>WENV183619407
OOFQ01004269
155786
Bacteroidota
TGG
Pro
>WENV183619644
OOFQ01026584
176707
Bacteroidota
TCT
Arg
>WENV183619406
OOFQ01004269
74253
Bacteroidota
GCT
Ser
>WENV183619851
OOFQ01063210
74253
Bacteroidota
GCT
Ser
>WENV183619452
OOFQ01007460
399285
Bacteroidota
TTC
Glu
>WENV183619764
OOFQ01045460
176427
Bacteroidota
TGG
Pro
>WENV183619723
OOFQ01038773
200516
Bacteroidota
CAT
Met
>WENV183619306
OOFQ01000876
181598
Bacteroidota
GTT
Asn
>WENV183619368
OOFQ01002448
118749
Bacteroidota
GTA
Tyr
>WENV183619853
OOFQ01063210
197245
Bacteroidota
TCT
Arg
>WENV183619402
OOFQ01004046
176817
Bacteroidota
CAT
Met
>WENV183619369
OOFQ01002448
289409
Bacteroidota
TCC
Gly
>WENV183619486
OOFQ01009827
176699
Bacteroidota
GTT
Asn
>WENV183619337
OOFQ01001485
177901
Bacteroidota
GTT
Asn
>WENV183619852
OOFQ01063210
156424
Bacteroidota
TGG
Pro
>WENV183619708
OOFQ01035596
56162
Bacteroidota
TGA
Ser
>WENV183619527
OOFQ01013774
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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