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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183623414
OOGA01000423
297858
Gammaproteobacteria
TGC
Ala
>WENV183623418
OOGA01000445
281282
Gammaproteobacteria
TTC
Glu
>WENV183623747
OOGA01060365
74416
Gammaproteobacteria
TAA
Leu
>WENV183623658
OOGA01029872
176069
Gammaproteobacteria
TCT
Arg
>WENV183623746
OOGA01060365
481678
Gammaproteobacteria
GCA
Cys
>WENV183623578
OOGA01012931
370389
Gammaproteobacteria
GGC
Ala
>WENV183623407
OOGA01000065
176301
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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