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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183644240
OQVP01006827
400161
Bacteroidota
GGT
Thr
>WENV183643919
OQVP01000871
156422
Bacteroidota
TAC
Val
>WENV183644391
OQVP01012704
280557
Bacteroidota
CAT
Met
>WENV183643808
OQVP01000337
118221
Bacteroidota
CAA
Leu
>WENV183644016
OQVP01002305
118221
Bacteroidota
CAA
Leu
>WENV183643860
OQVP01000522
178571
Bacteroidota
GTT
Asn
>WENV183643892
OQVP01000667
56385
Bacteroidota
TGA
Ser
>WENV183644000
OQVP01002060
57645
Bacteroidota
TGA
Ser
>WENV183643867
OQVP01000554
179697
Bacteroidota
TGT
Thr
>WENV183643722
OQVP01000015
404109
Bacteroidota
CTC
Glu
>WENV183644522
OQVP01022047
280478
Bacteroidota
GCC
Gly
>WENV183644007
OQVP01002149
187814
Bacteroidota
GTC
Asp
>WENV183644755
OQVP01067596
178134
Bacteroidota
TGG
Pro
>WENV183643941
OQVP01001101
481328
Bacteroidota
TTG
Gln
>WENV183643866
OQVP01000548
284456
Bacteroidota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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