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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183654806
OQWD01000875
406043
Verrucomicrobiota
GCA
Cys
>WENV183654794
OQWD01000793
293125
Verrucomicrobiota
GAA
Phe
>WENV183654646
OQWD01000136
406350
Verrucomicrobiota
TGT
Thr
>WENV183654633
OQWD01000093
101600
Verrucomicrobiota
AAG
Leu
>WENV183655425
OQWD01018196
293105
Verrucomicrobiota
CAT
Met
>WENV183654919
OQWD01002024
405901
Verrucomicrobiota
GCC
Gly
>WENV183654753
OQWD01000538
405901
Verrucomicrobiota
GCC
Gly
>WENV183654709
OQWD01000346
483642
Verrucomicrobiota
CCC
Gly
>WENV183654695
OQWD01000293
229220
Verrucomicrobiota
CAT
Met
>WENV183654628
OQWD01000082
8960
Verrucomicrobiota
CGA
Ser
>WENV183654827
OQWD01001012
101463
Verrucomicrobiota
TAA
Leu
>WENV183654821
OQWD01000983
157427
Verrucomicrobiota
GTC
Asp
>WENV183654809
OQWD01000905
293079
Verrucomicrobiota
CGC
Ala
>WENV183654772
OQWD01000637
120352
Verrucomicrobiota
TAG
Leu
>WENV183654828
OQWD01001012
292636
Verrucomicrobiota
>WENV183654807
OQWD01000875
298263
Verrucomicrobiota
TTC
Glu
>WENV183654978
OQWD01002945
293069
Verrucomicrobiota
CTT
Lys
>WENV183654977
OQWD01002945
293069
Verrucomicrobiota
CTT
Lys
>WENV183654650
OQWD01000159
406336
Verrucomicrobiota
CCT
Arg
>WENV183655141
OQWD01006649
406369
Verrucomicrobiota
CCG
Arg
>WENV183654798
OQWD01000807
405940
Verrucomicrobiota
GGT
Thr
>WENV183655046
OQWD01004468
406044
Verrucomicrobiota
CTG
Gln
>WENV183655003
OQWD01003604
187556
Verrucomicrobiota
GGG
Pro
>WENV183655256
OQWD01010046
406037
Verrucomicrobiota
GTG
His
>WENV183654721
OQWD01000407
406360
Verrucomicrobiota
GAC
Val
>WENV183654883
OQWD01001664
187548
Verrucomicrobiota
TCT
Arg
>WENV183654976
OQWD01002945
406040
Verrucomicrobiota
CGT
Thr
>WENV183655224
OQWD01009374
57652
Verrucomicrobiota
TGA
Ser
>WENV183654955
OQWD01002364
406039
Verrucomicrobiota
CAC
Val
>WENV183654785
OQWD01000710
75458
Verrucomicrobiota
CAG
Leu
>WENV183655052
OQWD01004639
406368
Verrucomicrobiota
TTG
Gln
>WENV183655021
OQWD01003850
21159
Verrucomicrobiota
GGA
Ser
>WENV183654963
OQWD01002450
101461
Verrucomicrobiota
GTA
Tyr
>WENV183654954
OQWD01002359
293095
Verrucomicrobiota
TTT
Lys
>WENV183654671
OQWD01000207
187561
Verrucomicrobiota
CGG
Pro
>WENV183654808
OQWD01000895
406342
Verrucomicrobiota
CAT
Met
>WENV183654859
OQWD01001318
406351
Verrucomicrobiota
GTT
Asn
>WENV183654829
OQWD01001037
303305
Verrucomicrobiota
GGC
Ala
>WENV183654708
OQWD01000346
507474
Verrucomicrobiota
TCC
Gly
>WENV183655184
OQWD01007877
406346
Verrucomicrobiota
TAC
Val
>WENV183654814
OQWD01000939
8938
Verrucomicrobiota
GCT
Ser
>WENV183654795
OQWD01000793
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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