This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1001729
SRR001308.20491
77010
Alphaproteobacteria
GAG
Leu
>SRA1001738
SRR001308.22212
191064
Alphaproteobacteria
CCG
Arg
>SRA1001752
SRR001308.31988
288727
Alphaproteobacteria
>SRA1001777
SRR001308.48986
415482
Alphaproteobacteria
GCC
Gly
>SRA1001798
SRR001308.59419
208947
Alphaproteobacteria
CAT
Met
>SRA1001817
SRR001308.69686
315852
Alphaproteobacteria
TGT
Thr
>SRA1001848
SRR001308.89240
415482
Alphaproteobacteria
GCC
Gly
>SRA1001851
SRR001308.90767
182475
Alphaproteobacteria
GTC
Asp
>SRA1001876
SRR001308.105433
480418
Alphaproteobacteria
GCA
Cys
>SRA1001885
SRR001308.108939
193373
Alphaproteobacteria
CGG
Pro
>SRA1001909
SRR001308.120671
315852
Alphaproteobacteria
TGT
Thr
>SRA1001935
SRR001308.139830
288727
Alphaproteobacteria
>SRA1001941
SRR001308.142472
481099
Alphaproteobacteria
TCC
Gly
>SRA1001949
SRR001308.144244
288727
Alphaproteobacteria
>SRA1001979
SRR001308.161963
288727
Alphaproteobacteria
>SRA1001986
SRR001308.167363
118150
Alphaproteobacteria
TAG
Leu
>SRA1002011
SRR001308.183845
400387
Alphaproteobacteria
GGT
Thr
>SRA1002022
SRR001308.191481
415482
Alphaproteobacteria
GCC
Gly
>SRA1002055
SRR001308.215553
77010
Alphaproteobacteria
GAG
Leu
>SRA1002074
SRR001308.226542
398996
Alphaproteobacteria
GCC
Gly
>SRA1002081
SRR001308.232502
196768
Alphaproteobacteria
GTG
His
>SRA1002133
SRR001308.264604
398980
Alphaproteobacteria
GAC
Val
>SRA1002156
SRR001308.275593
282658
Alphaproteobacteria
CGT
Thr
>SRA1002188
SRR001308.294589
400186
Alphaproteobacteria
GTT
Asn
>SRA1002214
SRR001308.307791
400223
Alphaproteobacteria
GGT
Thr
>SRA1002260
SRR001308.331715
118482
Alphaproteobacteria
CAG
Leu
>SRA1002276
SRR001308.343557
288727
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK