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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1005835
SRR014587.277668
77010
Alphaproteobacteria
GAG
Leu
>SRA1005831
SRR014587.261243
337513
Alphaproteobacteria
TGT
Thr
>SRA1005805
SRR014587.185023
337513
Alphaproteobacteria
TGT
Thr
>SRA1005772
SRR014587.81709
337513
Alphaproteobacteria
TGT
Thr
>SRA1005815
SRR014587.209369
490723
Alphaproteobacteria
CTG
Gln
>SRA1005798
SRR014587.168039
335898
Alphaproteobacteria
TGC
Ala
>SRA1005836
SRR014587.278475
178339
Alphaproteobacteria
CCG
Arg
>SRA1005787
SRR014587.133764
178339
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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