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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1011936
SRR020493.126315
140963
Alphaproteobacteria
>SRA1011976
SRR020493.141359
314617
Alphaproteobacteria
TAC
Val
>SRA1012113
SRR020493.184390
178510
Alphaproteobacteria
ACG
Arg
>SRA1012492
SRR020493.330398
314617
Alphaproteobacteria
TAC
Val
>SRA1012602
SRR020493.366136
178510
Alphaproteobacteria
ACG
Arg
>SRA1012764
SRR020493.420870
398994
Alphaproteobacteria
GTT
Asn
>SRA1012789
SRR020493.430622
400387
Alphaproteobacteria
GGT
Thr
>SRA1011854
SRR020493.98844
201940
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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