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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1047473
SRR035093.548872
188085
Alphaproteobacteria
GTC
Asp
>SRA1045704
SRR035093.152839
188085
Alphaproteobacteria
GTC
Asp
>SRA1046096
SRR035093.235740
178509
Alphaproteobacteria
CCT
Arg
>SRA1045894
SRR035093.192654
399879
Alphaproteobacteria
GTT
Asn
>SRA1047365
SRR035093.524006
73440
Alphaproteobacteria
CAG
Leu
>SRA1045163
SRR035093.14570
73440
Alphaproteobacteria
CAG
Leu
>SRA1046152
SRR035093.246074
401037
Alphaproteobacteria
TTG
Gln
>SRA1046450
SRR035093.309424
118146
Alphaproteobacteria
GAG
Leu
>SRA1045698
SRR035093.152250
405688
Alphaproteobacteria
GTT
Asn
>SRA1047396
SRR035093.530319
291892
Alphaproteobacteria
TAC
Val
>SRA1046802
SRR035093.389484
291892
Alphaproteobacteria
TAC
Val
>SRA1045771
SRR035093.166309
291892
Alphaproteobacteria
TAC
Val
>SRA1045718
SRR035093.156177
291892
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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