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tRNADB-CE

: tRNA gene database curated manually by experts

Takashi Abe¹, Toshimichi Ikemura², Junichi Sugahara³, Akio Kanai³, Yasuo Ohara², Hiroshi Uehara², Makoto Kinouchi⁴,

Shigehiko Kanaya⁵, Yuko Yamada², Akira Muto⁶, Hachiro Inokuchi²

¹. Niigata Univ., ². Nagahama Inst. of Bio-Sci. and Tech., ³. Keio Univ., ⁴. Yamagata Univ., ⁵. NAIST, ⁶. Hirosaki Univ.

The tRNA gene list of Cluster Cluster_40722

[Back] [Back to tRNADB-CE]

Sequence ID	Genome ID	Domain	Phylum/Class	Species	Amino Acid	Anticodon
C007286	AE016825	Bacteria	Betaproteobacteria	Chromobacterium violaceum ATCC 12472	Gly	GCC
C007287	AE016825	Bacteria	Betaproteobacteria	Chromobacterium violaceum ATCC 12472	Gly	GCC
C007288	AE016825	Bacteria	Betaproteobacteria	Chromobacterium violaceum ATCC 12472	Gly	GCC
C007289	AE016825	Bacteria	Betaproteobacteria	Chromobacterium violaceum ATCC 12472	Gly	GCC
C013913	CP000555	Bacteria	Betaproteobacteria	Methylibium petroleiphilum PM1	Gly	GCC
C019156	AL646052	Bacteria	Betaproteobacteria	Ralstonia solanacearum	Gly	GCC
C019157	AL646052	Bacteria	Betaproteobacteria	Ralstonia solanacearum	Gly	GCC
C027166	AE003849	Bacteria	Gammaproteobacteria	Xylella fastidiosa 9a5c	Gly	GCC
C027198	AE009442	Bacteria	Gammaproteobacteria	Xylella fastidiosa Temecula1	Gly	GCC
C027220	AE009442	Bacteria	Gammaproteobacteria	Xylella fastidiosa Temecula1	Gly	GCC
C08008271	CP001068	Bacteria	Betaproteobacteria	Ralstonia pickettii 12J	Gly	GCC
C08008272	CP001068	Bacteria	Betaproteobacteria	Ralstonia pickettii 12J	Gly	GCC
C08011542	CP000941	Bacteria	Gammaproteobacteria	Xylella fastidiosa M12	Gly	GCC
C08011565	CP000941	Bacteria	Gammaproteobacteria	Xylella fastidiosa M12	Gly	GCC
C08011591	CP001011	Bacteria	Gammaproteobacteria	Xylella fastidiosa M23	Gly	GCC
C08011614	CP001011	Bacteria	Gammaproteobacteria	Xylella fastidiosa M23	Gly	GCC
C09107046	CP001154	Bacteria	Betaproteobacteria	Laribacter hongkongensis HLHK9	Gly	GCC
C09107057	CP001154	Bacteria	Betaproteobacteria	Laribacter hongkongensis HLHK9	Gly	GCC
C09107058	CP001154	Bacteria	Betaproteobacteria	Laribacter hongkongensis HLHK9	Gly	GCC
C09107059	CP001154	Bacteria	Betaproteobacteria	Laribacter hongkongensis HLHK9	Gly	GCC
C09108991	CP001644	Bacteria	Betaproteobacteria	Ralstonia pickettii 12D	Gly	GCC
C09108992	CP001644	Bacteria	Betaproteobacteria	Ralstonia pickettii 12D	Gly	GCC
C10102504	CP002013	Bacteria	Betaproteobacteria	Burkholderia sp. CCGE1002	Gly	GCC
C11118940	CP002819	Bacteria	Betaproteobacteria	Ralstonia solanacearum Po82	Gly	GCC
C11118941	CP002819	Bacteria	Betaproteobacteria	Ralstonia solanacearum Po82	Gly	GCC
C11123947	CP002165	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. fastidiosa GB514	Gly	GCC
C11123972	CP002165	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. fastidiosa GB514	Gly	GCC
C121000562	AP012224	Bacteria	Betaproteobacteria	Pseudogulbenkiania sp. NH8B	Gly	GCC
C121000563	AP012224	Bacteria	Betaproteobacteria	Pseudogulbenkiania sp. NH8B	Gly	GCC
C121001123	AP012320	Bacteria	Betaproteobacteria	Rubrivivax gelatinosus IL144	Gly	GCC
C121014505	CP003555	Bacteria	Betaproteobacteria	Advenella kashmirensis WT001	Gly	GCC
C121016446	FP885897	Bacteria	Betaproteobacteria	Ralstonia solanacearum CFBP2957	Gly	GCC
C121016447	FP885897	Bacteria	Betaproteobacteria	Ralstonia solanacearum CFBP2957	Gly	GCC
C121016498	FP885906	Bacteria	Betaproteobacteria	Ralstonia solanacearum PSI07	Gly	GCC
C121016499	FP885906	Bacteria	Betaproteobacteria	Ralstonia solanacearum PSI07	Gly	GCC
C131010218	CP003942	Bacteria	Gammaproteobacteria	Serratia marcescens FGI94	Gly	GCC
C131010219	CP003942	Bacteria	Gammaproteobacteria	Serratia marcescens FGI94	Gly	GCC
C131010220	CP003942	Bacteria	Gammaproteobacteria	Serratia marcescens FGI94	Gly	GCC
C131010239	CP003942	Bacteria	Gammaproteobacteria	Serratia marcescens FGI94	Gly	GCC
C131010535	CP003959	Bacteria	Gammaproteobacteria	Serratia marcescens WW4	Gly	GCC
C131010552	CP003959	Bacteria	Gammaproteobacteria	Serratia marcescens WW4	Gly	GCC
C131011432	CP004012	Bacteria	Betaproteobacteria	Ralstonia solanacearum FQY_4	Gly	GCC
C131011433	CP004012	Bacteria	Betaproteobacteria	Ralstonia solanacearum FQY_4	Gly	GCC
C131018282	FP885895	Bacteria	Betaproteobacteria	Ralstonia solanacearum CMR15	Gly	GCC
C131018283	FP885895	Bacteria	Betaproteobacteria	Ralstonia solanacearum CMR15	Gly	GCC
C151001194	AP013063	Bacteria	Gammaproteobacteria	Serratia marcescens SM39	Gly	GCC
C151004364	CP003424	Bacteria	Gammaproteobacteria	Serratia sp. SCBI	Gly	GCC
C151004381	CP003424	Bacteria	Gammaproteobacteria	Serratia sp. SCBI	Gly	GCC
C151004949	CP003915	Bacteria	Betaproteobacteria	Advenella mimigardefordensis DPN7	Gly	GCC
C151007391	CP005927	Bacteria	Gammaproteobacteria	Serratia sp. FS14	Gly	GCC
C151007420	CP005927	Bacteria	Gammaproteobacteria	Serratia sp. FS14	Gly	GCC
C151011001	CP006696	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. sandyi Ann-1	Gly	GCC
C151011005	CP006696	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. sandyi Ann-1	Gly	GCC
C151011673	CP006740	Bacteria	Gammaproteobacteria	Xylella fastidiosa MUL0034	Gly	GCC
C151011703	CP006740	Bacteria	Gammaproteobacteria	Xylella fastidiosa MUL0034	Gly	GCC
C151072414	CP010799	Bacteria	Betaproteobacteria	Ralstonia mannitolilytica SN82F48	Gly	GCC
C151072415	CP010799	Bacteria	Betaproteobacteria	Ralstonia mannitolilytica SN82F48	Gly	GCC
C151085659	CP011642	Bacteria	Gammaproteobacteria	Serratia marcescens CAV1492	Gly	GCC
C151085680	CP011642	Bacteria	Gammaproteobacteria	Serratia marcescens CAV1492	Gly	GCC
C151089137	CP011997	Bacteria	Betaproteobacteria	Ralstonia solanacearum YC45	Gly	GCC
C151090591	CP012073	Bacteria	Betaproteobacteria	Ottowia sp. oral taxon 894 W10237	Gly	GCC
C151090592	CP012073	Bacteria	Betaproteobacteria	Ottowia sp. oral taxon 894 W10237	Gly	GCC
C151096651	CP012639	Bacteria	Gammaproteobacteria	Serratia marcescens RSC-14	Gly	GCC
C151096673	CP012639	Bacteria	Gammaproteobacteria	Serratia marcescens RSC-14	Gly	GCC
C151097421	CP012685	Bacteria	Gammaproteobacteria	Serratia marcescens SmUNAM836	Gly	GCC
C151097455	CP012685	Bacteria	Gammaproteobacteria	Serratia marcescens SmUNAM836	Gly	GCC
C151100361	HG326223	Bacteria	Gammaproteobacteria	Serratia marcescens subsp. marcescens Db11	Gly	GCC
C151100396	HG326223	Bacteria	Gammaproteobacteria	Serratia marcescens subsp. marcescens Db11	Gly	GCC
C161033004	CP011257	Bacteria	Betaproteobacteria	Ralstonia mannitolilytica SN83A39	Gly	GCC
C161033005	CP011257	Bacteria	Betaproteobacteria	Ralstonia mannitolilytica SN83A39	Gly	GCC
C161036461	CP011514	Bacteria	Betaproteobacteria	Mitsuaria sp. 7	Gly	GCC
C161036463	CP011514	Bacteria	Betaproteobacteria	Mitsuaria sp. 7	Gly	GCC
C161036464	CP011514	Bacteria	Betaproteobacteria	Mitsuaria sp. 7	Gly	GCC
C161037048	CP011774	Bacteria	Betaproteobacteria	Limnohabitans sp. 63ED37-2	Gly	GCC
C161037049	CP011774	Bacteria	Betaproteobacteria	Limnohabitans sp. 63ED37-2	Gly	GCC
C161037065	CP011774	Bacteria	Betaproteobacteria	Limnohabitans sp. 63ED37-2	Gly	GCC
C161038384	CP011971	Bacteria	Gammaproteobacteria	Steroidobacter denitrificans DSM 18526	Gly	GCC
C161043124	CP012605	Bacteria	Betaproteobacteria	Ralstonia insidiosa FC1138	Gly	GCC
C161043125	CP012605	Bacteria	Betaproteobacteria	Ralstonia insidiosa FC1138	Gly	GCC
C161043507	CP012687	Bacteria	Betaproteobacteria	Ralstonia solanacearum UY031	Gly	GCC
C161043508	CP012687	Bacteria	Betaproteobacteria	Ralstonia solanacearum UY031	Gly	GCC
C161047861	CP012939	Bacteria	Betaproteobacteria	Ralstonia solanacearum UW163	Gly	GCC
C161047862	CP012939	Bacteria	Betaproteobacteria	Ralstonia solanacearum UW163	Gly	GCC
C161047907	CP012943	Bacteria	Betaproteobacteria	Ralstonia solanacearum IBSBF1503	Gly	GCC
C161047908	CP012943	Bacteria	Betaproteobacteria	Ralstonia solanacearum IBSBF1503	Gly	GCC
C161050112	CP013046	Bacteria	Gammaproteobacteria	Serratia marcescens B3R3	Gly	GCC
C161050136	CP013046	Bacteria	Gammaproteobacteria	Serratia marcescens B3R3	Gly	GCC
C161060272	CP013729	Bacteria	Betaproteobacteria	Roseateles depolymerans KCTC 42856	Gly	GCC
C161060274	CP013729	Bacteria	Betaproteobacteria	Roseateles depolymerans KCTC 42856	Gly	GCC
C161060275	CP013729	Bacteria	Betaproteobacteria	Roseateles depolymerans KCTC 42856	Gly	GCC
C161072346	CP014474	Bacteria	Gammaproteobacteria	Serratia rubidaea 1122	Gly	GCC
C161072378	CP014474	Bacteria	Gammaproteobacteria	Serratia rubidaea 1122	Gly	GCC
C161076362	CP014702	Bacteria	Betaproteobacteria	Ralstonia solanacearum KACC 10722	Gly	GCC
C161076363	CP014702	Bacteria	Betaproteobacteria	Ralstonia solanacearum KACC 10722	Gly	GCC
C161091643	CP015850	Bacteria	Betaproteobacteria	Ralstonia solanacearum YC40-M	Gly	GCC
C161091644	CP015850	Bacteria	Betaproteobacteria	Ralstonia solanacearum YC40-M	Gly	GCC
C161093292	CP016022	Bacteria	Betaproteobacteria	Ralstonia insidiosa ATCC 49129	Gly	GCC
C161093293	CP016022	Bacteria	Betaproteobacteria	Ralstonia insidiosa ATCC 49129	Gly	GCC
C161093587	CP016032	Bacteria	Gammaproteobacteria	Serratia marcescens U36365	Gly	GCC
C161093611	CP016032	Bacteria	Gammaproteobacteria	Serratia marcescens U36365	Gly	GCC
C171002554	CP009764	Bacteria	Betaproteobacteria	Ralstonia solanacearum OE1-1 (CP009764)	Gly	GCC
C171002555	CP009764	Bacteria	Betaproteobacteria	Ralstonia solanacearum OE1-1 (CP009764)	Gly	GCC
C171002844	CP010051	Bacteria	Gammaproteobacteria	Xylella fastidiosa Fb7 (CP010051)	Gly	GCC
C171035699	CP015115	Bacteria	Betaproteobacteria	Ralstonia solanacearum EP1 (CP015115)	Gly	GCC
C171035700	CP015115	Bacteria	Betaproteobacteria	Ralstonia solanacearum EP1 (CP015115)	Gly	GCC
C171050161	CP016554	Bacteria	Betaproteobacteria	Ralstonia solanacearum FJAT-1458 (CP016554)	Gly	GCC
C171050162	CP016554	Bacteria	Betaproteobacteria	Ralstonia solanacearum FJAT-1458 (CP016554)	Gly	GCC
C171050186	CP016612	Bacteria	Betaproteobacteria	Ralstonia solanacearum FJAT-91 (CP016612)	Gly	GCC
C171050187	CP016612	Bacteria	Betaproteobacteria	Ralstonia solanacearum FJAT-91 (CP016612)	Gly	GCC
C171053125	CP016904	Bacteria	Betaproteobacteria	Ralstonia solanacearum KACC10709 (CP016904)	Gly	GCC
C171053126	CP016904	Bacteria	Betaproteobacteria	Ralstonia solanacearum KACC10709 (CP016904)	Gly	GCC
C171054183	CP016948	Bacteria	Gammaproteobacteria	Serratia sp. YD25 (CP016948)	Gly	GCC
C171054214	CP016948	Bacteria	Gammaproteobacteria	Serratia sp. YD25 (CP016948)	Gly	GCC
C171063539	CP017561	Bacteria	Betaproteobacteria	Paraburkholderia sprentiae WSM5005	Gly	GCC
C171066265	CP017707	Bacteria	Betaproteobacteria	Chromobacterium vaccinii 21-1 (CP017707)	Gly	GCC
C171066266	CP017707	Bacteria	Betaproteobacteria	Chromobacterium vaccinii 21-1 (CP017707)	Gly	GCC
C171066267	CP017707	Bacteria	Betaproteobacteria	Chromobacterium vaccinii 21-1 (CP017707)	Gly	GCC
C171066268	CP017707	Bacteria	Betaproteobacteria	Chromobacterium vaccinii 21-1 (CP017707)	Gly	GCC
C171066269	CP017707	Bacteria	Betaproteobacteria	Chromobacterium vaccinii 21-1 (CP017707)	Gly	GCC
C171094911	CP019509	Bacteria	Betaproteobacteria	Aquaspirillum sp. LM1 (CP019509)	Gly	GCC
C171094912	CP019509	Bacteria	Betaproteobacteria	Aquaspirillum sp. LM1 (CP019509)	Gly	GCC
C171094913	CP019509	Bacteria	Betaproteobacteria	Aquaspirillum sp. LM1 (CP019509)	Gly	GCC
C171103263	CP020046	Bacteria	Betaproteobacteria	Thiomonas intermedia ATCC 15466 (CP020046)	Gly	GCC
C171113945	CP020870	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. pauca De Donno (CP020870)	Gly	GCC
C171113973	CP020870	Bacteria	Gammaproteobacteria	Xylella fastidiosa subsp. pauca De Donno (CP020870)	Gly	GCC
C171119196	CP021448	Bacteria	Betaproteobacteria	Ralstonia solanacearum SEPPX05 (CP021448)	Gly	GCC
C171119197	CP021448	Bacteria	Betaproteobacteria	Ralstonia solanacearum SEPPX05 (CP021448)	Gly	GCC
C171119330	CP021455	Bacteria	Betaproteobacteria	Comamonas serinivorans DSM 26136 (CP021455)	Gly	GCC
C171119332	CP021455	Bacteria	Betaproteobacteria	Comamonas serinivorans DSM 26136 (CP021455)	Gly	GCC
C171119350	CP021455	Bacteria	Betaproteobacteria	Comamonas serinivorans DSM 26136 (CP021455)	Gly	GCC
C171127762	HG738868	Bacteria	Gammaproteobacteria	Serratia marcescens SMB2099 (HG738868)	Gly	GCC
C171127784	HG738868	Bacteria	Gammaproteobacteria	Serratia marcescens SMB2099 (HG738868)	Gly	GCC
PL171001407	CP019912	Plasmid	Betaproteobacteria	blood disease bacterium A2-HR MARDI plasmid:unnamed	Gly	GCC
PL171001408	CP019912	Plasmid	Betaproteobacteria	blood disease bacterium A2-HR MARDI plasmid:unnamed	Gly	GCC