tRNADB-CE: Statistics to Identical Sequence Groups

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tRNADB-CE

: tRNA gene database curated manually by experts

Takashi Abe¹, Toshimichi Ikemura², Junichi Sugahara³, Akio Kanai³, Yasuo Ohara², Hiroshi Uehara², Makoto Kinouchi⁴,

Shigehiko Kanaya⁵, Yuko Yamada², Akira Muto⁶, Hachiro Inokuchi²

¹. Niigata Univ., ². Nagahama Inst. of Bio-Sci. and Tech., ³. Keio Univ., ⁴. Yamagata Univ., ⁵. NAIST, ⁶. Hirosaki Univ.

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The tRNA gene list of Cluster Cluster_41425

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Sequence ID	Genome ID	Domain	Phylum/Class	Species	Amino Acid	Anticodon
C013066	CP000479	Bacteria	Actinobacteria	Mycobacterium avium 104	Arg	ACG
C013112	AE016958	Bacteria	Actinobacteria	Mycobacterium avium subsp. paratuberculosis K-10	Arg	ACG
C013506	CP000656	Bacteria	Actinobacteria	Mycobacterium gilvum PYR-GCK	Arg	ACG
C013643	AL450380	Bacteria	Actinobacteria	Mycobacterium leprae	Arg	ACG
C014038	CP000480	Bacteria	Actinobacteria	Mycobacterium smegmatis str. MC2 155	Arg	ACG
C014410	CP000325	Bacteria	Actinobacteria	Mycobacterium ulcerans Agy99	Arg	ACG
C014451	CP000511	Bacteria	Actinobacteria	Mycobacterium vanbaalenii PYR-1	Arg	ACG
C014561	CP000580	Bacteria	Actinobacteria	Mycobacterium sp. JLS	Arg	ACG
C014608	CP000518	Bacteria	Actinobacteria	Mycobacterium sp. KMS	Arg	ACG
C014655	CP000384	Bacteria	Actinobacteria	Mycobacterium sp. MCS	Arg	ACG
C014861	AP006618	Bacteria	Actinobacteria	Nocardia farcinica IFM 10152	Arg	ACG
C024788	CP000667	Bacteria	Actinobacteria	Salinispora tropica CNB-440	Arg	ACG
C08003931	AM942444	Bacteria	Actinobacteria	Corynebacterium urealyticum DSM 7109	Arg	ACG
C08003932	AM942444	Bacteria	Actinobacteria	Corynebacterium urealyticum DSM 7109	Arg	ACG
C08005698	CP000750	Bacteria	Actinobacteria	Kineococcus radiotolerans SRS30216	Arg	ACG
C08006303	CU458896	Bacteria	Actinobacteria	Mycobacterium abscessus	Arg	ACG
C08006608	CP000854	Bacteria	Actinobacteria	Mycobacterium marinum M	Arg	ACG
C08008460	CP000850	Bacteria	Actinobacteria	Salinispora arenicola CNS-205	Arg	ACG
C09100615	CP001630	Bacteria	Actinobacteria	Actinosynnema mirum DSM 43827	Arg	ACG
C09107691	FM211192	Bacteria	Actinobacteria	Mycobacterium leprae Br4923	Arg	ACG
C11115503	CP002385	Bacteria	Actinobacteria	Mycobacterium sp. Spyr1	Arg	ACG
C11117064	CP002593	Bacteria	Actinobacteria	Pseudonocardia dioxanivorans CB1190	Arg	ACG
C121001630	CP001663	Bacteria	Actinobacteria	Mycobacterium smegmatis str. MC2 155	Arg	ACG
C121004710	CP003053	Bacteria	Actinobacteria	Mycobacterium chubuense NBB4	Arg	ACG
C121007177	CP003169	Bacteria	Actinobacteria	Mycobacterium rhodesiae NBB3	Arg	ACG
C121010842	CP003322	Bacteria	Actinobacteria	Mycobacterium intracellulare ATCC 13950	Arg	ACG
C121010887	CP003323	Bacteria	Actinobacteria	Mycobacterium intracellulare MOTT-02	Arg	ACG
C121010932	CP003324	Bacteria	Actinobacteria	Mycobacterium intracellulare MOTT-64	Arg	ACG
C121013454	CP003491	Bacteria	Actinobacteria	Mycobacterium sp. MOTT36Y	Arg	ACG
C121015174	CP003699	Bacteria	Actinobacteria	Mycobacterium massiliense str. GO 06	Arg	ACG
C121015175	CP003699	Bacteria	Actinobacteria	Mycobacterium massiliense str. GO 06	Arg	ACG
C121016042	FO082843	Bacteria	Actinobacteria	Nocardia cyriacigeorgica GUH-2	Arg	ACG
C131001365	CP002275	Bacteria	Actinobacteria	Mycobacterium indicus pranii MTCC 9506	Arg	ACG
C131003329	CP003347	Bacteria	Actinobacteria	Mycobacterium yongonense 05-1390	Arg	ACG
C131009352	CP003899	Bacteria	Actinobacteria	Mycobacterium liflandii 128FXT	Arg	ACG
C131012700	CP004085	Bacteria	Actinobacteria	Corynebacterium urealyticum DSM 7111	Arg	ACG
C131012701	CP004085	Bacteria	Actinobacteria	Corynebacterium urealyticum DSM 7111	Arg	ACG
C131013684	CP004374	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii 50594	Arg	ACG
C131015930	CP005928	Bacteria	Actinobacteria	Mycobacterium avium subsp. paratuberculosis MAP4	Arg	ACG
C141004773	CP006365	Bacteria	Actinobacteria	Corynebacterium argentoratense DSM 44202	Arg	ACG
C141004774	CP006365	Bacteria	Actinobacteria	Corynebacterium argentoratense DSM 44202	Arg	ACG
C141010723	CP006936	Bacteria	Actinobacteria	Mycobacterium neoaurum VKM Ac-1815D	Arg	ACG
C141011355	CP006996	Bacteria	Actinobacteria	Rhodococcus pyridinivorans SB3094	Arg	ACG
C151001037	AP012555	Bacteria	Actinobacteria	Mycobacterium avium subsp. hominissuis TH135	Arg	ACG
C151001952	AP014547	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii CCUG 48898 = JCM 15300	Arg	ACG
C151013221	CP006841	Bacteria	Actinobacteria	Corynebacterium lactis RW2-5	Arg	ACG
C151013222	CP006841	Bacteria	Actinobacteria	Corynebacterium lactis RW2-5	Arg	ACG
C151017615	CP007155	Bacteria	Actinobacteria	Kutzneria albida DSM 43870	Arg	ACG
C151039855	CP008913	Bacteria	Actinobacteria	Corynebacterium sp. ATCC 6931	Arg	ACG
C151039856	CP008913	Bacteria	Actinobacteria	Corynebacterium sp. ATCC 6931	Arg	ACG
C151044200	CP009110	Bacteria	Actinobacteria	Amycolatopsis methanolica 239	Arg	ACG
C151050221	CP009407	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii 103	Arg	ACG
C151050222	CP009407	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii 103	Arg	ACG
C151050267	CP009408	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii MA 1948	Arg	ACG
C151051200	CP009447	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii MM1513	Arg	ACG
C151052522	CP009482	Bacteria	Actinobacteria	Mycobacterium avium subsp. avium 2285 (S)	Arg	ACG
C151052814	CP009493	Bacteria	Actinobacteria	Mycobacterium avium subsp. avium 2285 (R)	Arg	ACG
C151052882	CP009494	Bacteria	Actinobacteria	Mycobacterium smegmatis str. MC2 155 (CP009494)	Arg	ACG
C151052929	CP009495	Bacteria	Actinobacteria	Mycobacterium smegmatis INHR1	Arg	ACG
C151052976	CP009496	Bacteria	Actinobacteria	Mycobacterium smegmatis INHR2	Arg	ACG
C151053047	CP009499	Bacteria	Actinobacteria	Mycobacterium intracellulare 1956	Arg	ACG
C151055686	CP009613	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. bolletii MC1518	Arg	ACG
C151055731	CP009614	Bacteria	Actinobacteria	Mycobacterium avium subsp. avium DJO-44271	Arg	ACG
C151055798	CP009615	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. abscessus DJO-44274	Arg	ACG
C151055844	CP009616	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. abscessus 4529	Arg	ACG
C151061863	CP009914	Bacteria	Actinobacteria	Mycobacterium sp. VKM Ac-1817D	Arg	ACG
C151064735	CP010113	Bacteria	Actinobacteria	Mycobacterium avium subsp. paratuberculosis E1	Arg	ACG
C151064781	CP010114	Bacteria	Actinobacteria	Mycobacterium avium subsp. paratuberculosis E93	Arg	ACG
C151075003	CP010989	Bacteria	Actinobacteria	Pseudonocardia sp. EC080625-04	Arg	ACG
C151080793	CP011341	Bacteria	Actinobacteria	Rhodococcus aetherivorans IcdP1	Arg	ACG
C151086256	CP011773	Bacteria	Actinobacteria	Mycobacterium sp. EPa45	Arg	ACG
C151087143	CP011862	Bacteria	Actinobacteria	Pseudonocardia sp. AL041005-10	Arg	ACG
C151087198	CP011868	Bacteria	Actinobacteria	Pseudonocardia sp. HH130629-09	Arg	ACG
C151090038	CP012044	Bacteria	Actinobacteria	Mycobacterium abscessus UC22	Arg	ACG
C151091792	CP012150	Bacteria	Actinobacteria	Mycobacterium goodii X7B	Arg	ACG
C151101572	HG917972	Bacteria	Actinobacteria	Mycobacterium marinum E11	Arg	ACG
C151105055	LN850107	Bacteria	Actinobacteria	Alloactinosynnema sp. L-07	Arg	ACG
C161005485	CP007220	Bacteria	Actinobacteria	Mycobacterium chelonae CCUG 47445	Arg	ACG
C161023378	CP010071	Bacteria	Actinobacteria	Mycobacterium sp. QIA-37	Arg	ACG
C161029873	CP010946	Bacteria	Actinobacteria	Mycobacterium chelonae ATCC 35752	Arg	ACG
C161030666	CP010996	Bacteria	Actinobacteria	Mycobacterium simiae MO323	Arg	ACG
C161031128	CP011022	Bacteria	Actinobacteria	Mycobacterium sp. NRRL B-3805	Arg	ACG
C161033213	CP011269	Bacteria	Actinobacteria	Mycobacterium fortuitum CT6	Arg	ACG
C161036288	CP011491	Bacteria	Actinobacteria	Mycobacterium vaccae 95051	Arg	ACG
C161036554	CP011530	Bacteria	Actinobacteria	Mycobacterium immunogenum CCUG 47286	Arg	ACG
C161037603	CP011853	Bacteria	Actinobacteria	Gordonia sp. QH-11	Arg	ACG
C161037757	CP011883	Bacteria	Actinobacteria	Mycobacterium haemophilum DSM 44634 ATCC 29548	Arg	ACG
C161040362	CP012181	Bacteria	Actinobacteria	Pseudonocardia sp. EC080610-09	Arg	ACG
C161040410	CP012184	Bacteria	Actinobacteria	Pseudonocardia sp. EC080619-01	Arg	ACG
C161050279	CP013049	Bacteria	Actinobacteria	Mycobacterium abscessus NOV0213	Arg	ACG
C161061311	CP013854	Bacteria	Actinobacteria	Pseudonocardia sp. HH130630-07	Arg	ACG
C161069646	CP014258	Bacteria	Actinobacteria	Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841	Arg	ACG
C161079492	CP014950	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC003	Arg	ACG
C161079538	CP014951	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC004	Arg	ACG
C161079617	CP014952	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC005	Arg	ACG
C161079663	CP014953	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC007	Arg	ACG
C161079742	CP014954	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC008	Arg	ACG
C161079822	CP014955	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC013	Arg	ACG
C161079868	CP014956	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC029	Arg	ACG
C161079914	CP014957	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC031	Arg	ACG
C161079960	CP014958	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC045	Arg	ACG
C161080039	CP014959	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC048	Arg	ACG
C161080085	CP014960	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC049	Arg	ACG
C161080131	CP014961	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC054	Arg	ACG
C161088856	CP015495	Bacteria	Actinobacteria	Mycobacterium avium subsp. paratuberculosis MAP/TANUVAS/TN/India/2008	Arg	ACG
C161089608	CP015596	Bacteria	Actinobacteria	Mycobacterium sp. YC-RL4	Arg	ACG
C161094475	CP016188	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC006	Arg	ACG
C161094521	CP016189	Bacteria	Actinobacteria	Mycobacterium immunogenum FLAC016	Arg	ACG
C161094577	CP016190	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC028	Arg	ACG
C161094623	CP016191	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC030	Arg	ACG
C161094669	CP016192	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC046	Arg	ACG
C161094715	CP016193	Bacteria	Actinobacteria	Mycobacterium abscessus FLAC055	Arg	ACG
C161097064	CP016396	Bacteria	Actinobacteria	Mycobacterium avium RCAD0278	Arg	ACG
C161100470	CP016640	Bacteria	Actinobacteria	Mycobacterium sp. djl-10	Arg	ACG
C161106295	LN831039	Bacteria	Actinobacteria	Mycobacterium smegmatis NCTC8159	Arg	ACG
C171001860	CP009245	Bacteria	Actinobacteria	Corynebacterium aquilae DSM 44791 S-613 (CP009245)	Arg	ACG
C171001861	CP009245	Bacteria	Actinobacteria	Corynebacterium aquilae DSM 44791 S-613 (CP009245)	Arg	ACG
C171002016	CP009248	Bacteria	Actinobacteria	Corynebacterium sphenisci DSM 44792 (CP009248)	Arg	ACG
C171002017	CP009248	Bacteria	Actinobacteria	Corynebacterium sphenisci DSM 44792 (CP009248)	Arg	ACG
C171007296	CP010271	Bacteria	Actinobacteria	Mycobacterium saopaulense EPM10906 (CP010271)	Arg	ACG
C171018937	CP012885	Bacteria	Actinobacteria	Mycobacterium chimaera AH16 (CP012885)	Arg	ACG
C171034662	CP014989	Bacteria	Actinobacteria	Serinicoccus sp. JLT9 (CP014989)	Arg	ACG
C171039226	CP015529	Bacteria	Actinobacteria	Rhodococcus sp. WB1 (CP015529)	Arg	ACG
C171044536	CP015961	Bacteria	Actinobacteria	Dietzia timorensis ID05-A0528 (CP015961)	Arg	ACG
C171044583	CP015964	Bacteria	Actinobacteria	Mycobacterium yongonense Asan 36912 (CP015964)	Arg	ACG
C171044628	CP015965	Bacteria	Actinobacteria	Mycobacterium yongonense Asan 36527 (CP015965)	Arg	ACG
C171051543	CP016819	Bacteria	Actinobacteria	Rhodococcus sp. p52 (CP016819)	Arg	ACG
C171071861	CP018043	Bacteria	Actinobacteria	Mycobacterium sp. WY10 (CP018043)	Arg	ACG
C171072230	CP018063	Bacteria	Actinobacteria	Rhodococcus sp. 2G (CP018063)	Arg	ACG
C171078109	CP018363	Bacteria	Actinobacteria	Mycobacterium avium subsp. hominissuis H87 (CP018363)	Arg	ACG
C171091436	CP019221	Bacteria	Actinobacteria	Mycobacterium chimaera CDC 2015-22-71 (CP019221)	Arg	ACG
C171100689	CP019882	Bacteria	Actinobacteria	Mycobacterium litorale F4 (CP019882)	Arg	ACG
C171112397	CP020809	Bacteria	Actinobacteria	Mycobacterium sp. PH-06 (CP020809)	Arg	ACG
C171112677	CP020821	Bacteria	Actinobacteria	Mycobacterium colombiense CECT 3035 (CP020821)	Arg	ACG
C171116018	CP021122	Bacteria	Actinobacteria	Mycobacterium abscessus subsp. massiliense FLAC047 (CP021122)	Arg	ACG
C171130884	LT703505	Bacteria	Actinobacteria	Mycobacterium chimaera Mycobacterium chimaera MC045 (LT703505)	Arg	ACG
PL171001803	LN868939	Plasmid	Actinobacteria	Nocardia farcinica NCTC11134 plasmid:2	Arg	ACG