This is the navigation skips to jump to main contents

• Jump to main contents.

tRNADB-CE

: tRNA gene database curated manually by experts

Takashi Abe¹, Toshimichi Ikemura², Junichi Sugahara³, Akio Kanai³, Yasuo Ohara², Hiroshi Uehara², Makoto Kinouchi⁴,

Shigehiko Kanaya⁵, Yuko Yamada², Akira Muto⁶, Hachiro Inokuchi²

¹. Niigata Univ., ². Nagahama Inst. of Bio-Sci. and Tech., ³. Keio Univ., ⁴. Yamagata Univ., ⁵. NAIST, ⁶. Hirosaki Univ.

The detailed list of identical sequence groups that Caudovirales and Enterobacteria were mixed.

Cluster ID	Occupancy	Amino Acid	Anticodon	The detailed list (Phylum/Class name@number)
Cluster_6072	75.00	Ser	TGA	Caudovirales@21	Enterobacteria@7
Cluster_7111	66.67	Ser	GCT	Caudovirales@2	Enterobacteria@4
Cluster_12576	75.76	Leu	TAA	Caudovirales@25	Enterobacteria@8
Cluster_12580	83.33	Tyr	GTA	Caudovirales@5	Enterobacteria@1
Cluster_12581	84.62	Tyr	GTA	Caudovirales@11	Enterobacteria@2
Cluster_19090	60.00	Asn	GTT	Caudovirales@3	Enterobacteria@1	Salmonella@1
Cluster_19580	72.73	Leu	TAA	Caudovirales@8	Enterobacteria@1	unclassified phages@2
Cluster_22071	80.00	Glu	TTC	Caudovirales@4	Enterobacteria@1
Cluster_22072	63.64	Leu	CAA	Caudovirales@7	Enterobacteria@1	unclassified phages@3
Cluster_22074	80.00	Asn	GTT	Caudovirales@1	Enterobacteria@4
Cluster_22075	50.00	Met	CAT	Caudovirales@4	Enterobacteria@5	Salmonella@1
Cluster_37950	74.07	Pro	TGG	Caudovirales@20	Enterobacteria@7
Cluster_37951	77.78	Met	CAT	Caudovirales@7	Enterobacteria@2
Cluster_37953	75.00	Pro	TGG	Caudovirales@9	Enterobacteria@1	unclassified phages@2
Cluster_37961	40.00	Leu	TAA	Caudovirales@2	Enterobacteria@1	Salmonella@1	unclassified phages@1
Cluster_37962	40.00	Glu	TTC	Caudovirales@2	Enterobacteria@1	Salmonella@1	unclassified phages@1
Cluster_38020	70.00	Met	CAT	Caudovirales@7	Enterobacteria@1	unclassified phages@2
Cluster_55714	33.33	Cys	GCA	Caudovirales@2	Enterobacteria@2	unclassified phages@2
Cluster_55715	68.75	Gln	TTG	Caudovirales@11	Enterobacteria@5
Cluster_55716	70.00	Thr	TGT	Caudovirales@14	Enterobacteria@6
Cluster_55721	87.50	Arg	ACG	Caudovirales@7	Enterobacteria@1
Cluster_55722	78.57	Gln	TTG	Caudovirales@11	Enterobacteria@1	unclassified phages@2
Cluster_55723	50.00	Gln	CTG	Caudovirales@3	Enterobacteria@1	unclassified phages@2
Cluster_55724	85.71	His	GTG	Caudovirales@6	Enterobacteria@1
Cluster_55729	80.00	Cys	GCA	Caudovirales@1	Enterobacteria@4
Cluster_55732	66.67	Met	CAT	Caudovirales@2	Enterobacteria@4
Cluster_55734	40.00	Gln	TTG	Caudovirales@2	Enterobacteria@1	Salmonella@1	unclassified phages@1
Cluster_55742	76.92	Arg	TCT	Caudovirales@10	Enterobacteria@3
Cluster_55743	87.50	Gln	TTG	Caudovirales@14	Enterobacteria@2
Cluster_55779	80.00	Arg	CCT	Caudovirales@4	Enterobacteria@1
Cluster_55793	91.67	Thr	TGT	Caudovirales@11	Enterobacteria@1
Cluster_65437	70.00	Arg	TCT	Caudovirales@7	Enterobacteria@3
Cluster_65440	71.43	Gly	TCC	Caudovirales@10	Enterobacteria@1	unclassified phages@3
Cluster_65441	75.00	Val	TAC	Caudovirales@9	Enterobacteria@1	unclassified phages@2
Cluster_65442	50.00	Arg	TCT	Caudovirales@3	Enterobacteria@4	Salmonella@1
Cluster_65450	84.00	Met	CAT	Caudovirales@21	Enterobacteria@4
Cluster_65451	85.00	Asn	GTT	Caudovirales@17	Enterobacteria@3
Cluster_69745	77.78	Gly	TCC	Caudovirales@14	Enterobacteria@4
Cluster_69750	82.35	Gly	TCC	Caudovirales@14	Enterobacteria@3
Cluster_69774	83.33	Met	CAT	Caudovirales@5	Enterobacteria@1