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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
18
GGA
24
GTA
12
GCA
18
C
Leu
TAA
12
TGA
24
ochre
TTA
0
opal Sec
TCA
2
A
CAA
20
CGA
24
amber
CTA
0
Trp
CCA
26
G
C
Leu
AAG
0
Pro
AGG
2
His
ATG
0
Arg
ACG
12
T
GAG
18
GGG
18
GTG
20
GCG
8
C
TAG
24
TGG
20
Gln
TTG
20
TCG
18
A
CAG
20
CGG
18
CTG
18
CCG
18
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
18
GGT
12
GTT
24
GCT
22
C
TAT
2
TGT
12
Lys
TTT
16
Arg
TCT
16
A
Met
CAT
56
CGT
26
CTT
20
CCT
20
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
20
GGC
20
GTC
20
GCC
22
C
TAC
18
TGC
18
Glu
TTC
28
TCC
18
A
CAC
14
CGC
18
CTC
12
CCC
18
G
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