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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
5
GGA
4
GTA
8
GCA
5
C
Leu
TAA
6
TGA
5
ochre
TTA
0
opal Sec
TCA
0
A
CAA
3
CGA
2
amber
CTA
0
Trp
CCA
4
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
4
T
GAG
7
GGG
4
GTG
8
GCG
2
C
TAG
9
TGG
4
Gln
TTG
7
TCG
5
A
CAG
5
CGG
3
CTG
4
CCG
3
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
8
GGT
3
GTT
8
GCT
9
C
TAT
1
TGT
9
Lys
TTT
8
Arg
TCT
4
A
Met
CAT
15
CGT
2
CTT
3
CCT
6
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
1
T
GAC
4
GGC
2
GTC
5
GCC
4
C
TAC
3
TGC
10
Glu
TTC
4
TCC
8
A
CAC
1
CGC
0
CTC
3
CCC
3
G
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