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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
49
GGA
49
GTA
32
GCA
69
C
Leu
TAA
99
TGA
73
ochre
TTA
0
opal Sec
TCA
4
A
CAA
48
CGA
21
amber
CTA
0
Trp
CCA
65
G
C
Leu
AAG
4
Pro
AGG
1
His
ATG
0
Arg
ACG
51
T
GAG
43
GGG
40
GTG
58
GCG
21
C
TAG
70
TGG
59
Gln
TTG
78
TCG
55
A
CAG
6
CGG
4
CTG
9
CCG
15
G
A
Ile
AAT
4
Thr
AGT
3
Asn
ATT
0
Ser
ACT
0
T
GAT
35
GGT
37
GTT
79
GCT
55
C
TAT
15
TGT
81
Lys
TTT
89
Arg
TCT
109
A
Met
CAT
163
CGT
27
CTT
10
CCT
30
G
G
Val
AAC
1
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
28
GGC
85
GTC
57
GCC
68
C
TAC
57
TGC
57
Glu
TTC
78
TCC
59
A
CAC
4
CGC
3
CTC
13
CCC
7
G
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