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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
63
GGA
106
GTA
48
GCA
124
C
Leu
TAA
169
TGA
89
ochre
TTA
0
opal Sec
TCA
4
A
CAA
100
CGA
14
amber
CTA
0
Trp
CCA
80
G
C
Leu
AAG
3
Pro
AGG
0
His
ATG
0
Arg
ACG
103
T
GAG
66
GGG
60
GTG
64
GCG
12
C
TAG
80
TGG
69
Gln
TTG
103
TCG
93
A
CAG
13
CGG
5
CTG
4
CCG
13
G
A
Ile
AAT
2
Thr
AGT
6
Asn
ATT
0
Ser
ACT
0
T
GAT
38
GGT
69
GTT
87
GCT
82
C
TAT
41
TGT
137
Lys
TTT
137
Arg
TCT
132
A
Met
CAT
315
CGT
20
CTT
9
CCT
66
G
G
Val
AAC
0
Ala
AGC
1
Asp
ATC
0
Gly
ACC
0
T
GAC
97
GGC
58
GTC
51
GCC
89
C
TAC
77
TGC
67
Glu
TTC
103
TCC
81
A
CAC
1
CGC
0
CTC
2
CCC
3
G
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