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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
29
GGA
36
GTA
22
GCA
38
C
Leu
TAA
93
TGA
57
ochre
TTA
0
opal Sec
TCA
0
A
CAA
37
CGA
5
amber
CTA
0
Trp
CCA
35
G
C
Leu
AAG
5
Pro
AGG
0
His
ATG
0
Arg
ACG
39
T
GAG
33
GGG
34
GTG
22
GCG
11
C
TAG
48
TGG
46
Gln
TTG
64
TCG
36
A
CAG
5
CGG
1
CTG
4
CCG
12
G
A
Ile
AAT
3
Thr
AGT
8
Asn
ATT
0
Ser
ACT
1
T
GAT
29
GGT
27
GTT
56
GCT
39
C
TAT
20
TGT
81
Lys
TTT
55
Arg
TCT
87
A
Met
CAT
117
CGT
14
CTT
6
CCT
28
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
25
GGC
22
GTC
21
GCC
43
C
TAC
70
TGC
40
Glu
TTC
51
TCC
57
A
CAC
0
CGC
0
CTC
2
CCC
5
G
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