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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
36
GGA
41
GTA
26
GCA
61
C
Leu
TAA
58
TGA
44
ochre
TTA
0
opal Sec
TCA
4
A
CAA
42
CGA
15
amber
CTA
0
Trp
CCA
48
G
C
Leu
AAG
3
Pro
AGG
0
His
ATG
0
Arg
ACG
36
T
GAG
37
GGG
24
GTG
46
GCG
20
C
TAG
37
TGG
44
Gln
TTG
50
TCG
45
A
CAG
5
CGG
4
CTG
8
CCG
14
G
A
Ile
AAT
0
Thr
AGT
1
Asn
ATT
0
Ser
ACT
1
T
GAT
28
GGT
32
GTT
54
GCT
52
C
TAT
7
TGT
55
Lys
TTT
55
Arg
TCT
63
A
Met
CAT
130
CGT
20
CTT
7
CCT
24
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
27
GGC
33
GTC
35
GCC
31
C
TAC
41
TGC
41
Glu
TTC
40
TCC
43
A
CAC
2
CGC
2
CTC
5
CCC
8
G
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