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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEPI] marine metagenome genome assembly TARA_041_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
6
GGA
3
GTA
11
GCA
9
C
Leu
TAA
20
TGA
8
ochre
TTA
0
opal Sec
TCA
0
A
CAA
5
CGA
4
amber
CTA
0
Trp
CCA
5
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
6
T
GAG
3
GGG
1
GTG
6
GCG
2
C
TAG
7
TGG
7
Gln
TTG
7
TCG
1
A
CAG
2
CGG
1
CTG
1
CCG
1
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
1
GGT
6
GTT
11
GCT
3
C
TAT
4
TGT
19
Lys
TTT
10
Arg
TCT
22
A
Met
CAT
20
CGT
2
CTT
2
CCT
5
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
3
GGC
4
GTC
4
GCC
5
C
TAC
8
TGC
14
Glu
TTC
11
TCC
12
A
CAC
1
CGC
1
CTC
1
CCC
0
G
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