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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
52
GGA
65
GTA
39
GCA
70
C
Leu
TAA
105
TGA
53
ochre
TTA
0
opal Sec
TCA
7
A
CAA
54
CGA
24
amber
CTA
0
Trp
CCA
58
G
C
Leu
AAG
6
Pro
AGG
0
His
ATG
0
Arg
ACG
66
T
GAG
60
GGG
45
GTG
48
GCG
17
C
TAG
69
TGG
58
Gln
TTG
83
TCG
55
A
CAG
16
CGG
4
CTG
19
CCG
28
G
A
Ile
AAT
0
Thr
AGT
3
Asn
ATT
0
Ser
ACT
0
T
GAT
36
GGT
65
GTT
91
GCT
48
C
TAT
17
TGT
89
Lys
TTT
114
Arg
TCT
142
A
Met
CAT
188
CGT
27
CTT
17
CCT
48
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
1
T
GAC
49
GGC
41
GTC
57
GCC
75
C
TAC
72
TGC
62
Glu
TTC
71
TCC
61
A
CAC
6
CGC
7
CTC
14
CCC
12
G
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