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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
12
GGA
10
GTA
8
GCA
25
C
Leu
TAA
39
TGA
10
ochre
TTA
0
opal Sec
TCA
0
A
CAA
14
CGA
5
amber
CTA
0
Trp
CCA
10
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
16
T
GAG
7
GGG
8
GTG
11
GCG
0
C
TAG
10
TGG
19
Gln
TTG
12
TCG
1
A
CAG
9
CGG
8
CTG
6
CCG
14
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
9
GGT
8
GTT
19
GCT
13
C
TAT
11
TGT
26
Lys
TTT
25
Arg
TCT
54
A
Met
CAT
49
CGT
8
CTT
7
CCT
7
G
G
Val
AAC
1
Ala
AGC
0
Asp
ATC
1
Gly
ACC
1
T
GAC
10
GGC
7
GTC
8
GCC
10
C
TAC
13
TGC
17
Glu
TTC
23
TCC
13
A
CAC
5
CGC
2
CTC
1
CCC
2
G
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