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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
4
GGA
7
GTA
5
GCA
10
C
Leu
TAA
20
TGA
7
ochre
TTA
0
opal Sec
TCA
0
A
CAA
7
CGA
2
amber
CTA
0
Trp
CCA
9
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
8
T
GAG
3
GGG
3
GTG
9
GCG
0
C
TAG
5
TGG
7
Gln
TTG
9
TCG
2
A
CAG
2
CGG
3
CTG
2
CCG
1
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
1
Ser
ACT
0
T
GAT
5
GGT
5
GTT
13
GCT
6
C
TAT
3
TGT
18
Lys
TTT
12
Arg
TCT
22
A
Met
CAT
18
CGT
3
CTT
1
CCT
4
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
1
Gly
ACC
0
T
GAC
4
GGC
4
GTC
5
GCC
4
C
TAC
7
TGC
12
Glu
TTC
8
TCC
9
A
CAC
3
CGC
0
CTC
1
CCC
0
G
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