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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CERP] marine metagenome genome assembly TARA_067_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
5
GGA
3
GTA
11
GCA
9
C
Leu
TAA
37
TGA
6
ochre
TTA
0
opal Sec
TCA
0
A
CAA
8
CGA
0
amber
CTA
0
Trp
CCA
12
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
6
T
GAG
2
GGG
3
GTG
9
GCG
0
C
TAG
13
TGG
22
Gln
TTG
19
TCG
3
A
CAG
2
CGG
1
CTG
1
CCG
1
G
A
Ile
AAT
0
Thr
AGT
2
Asn
ATT
0
Ser
ACT
0
T
GAT
5
GGT
5
GTT
33
GCT
10
C
TAT
14
TGT
29
Lys
TTT
26
Arg
TCT
98
A
Met
CAT
65
CGT
3
CTT
1
CCT
4
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
1
T
GAC
2
GGC
3
GTC
13
GCC
5
C
TAC
15
TGC
22
Glu
TTC
17
TCC
23
A
CAC
0
CGC
0
CTC
0
CCC
1
G
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