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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
4
GGA
6
GTA
8
GCA
9
C
Leu
TAA
18
TGA
7
ochre
TTA
0
opal Sec
TCA
0
A
CAA
7
CGA
3
amber
CTA
0
Trp
CCA
9
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
9
T
GAG
6
GGG
6
GTG
9
GCG
0
C
TAG
8
TGG
10
Gln
TTG
9
TCG
1
A
CAG
5
CGG
3
CTG
4
CCG
6
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
4
GGT
6
GTT
12
GCT
5
C
TAT
6
TGT
14
Lys
TTT
9
Arg
TCT
31
A
Met
CAT
31
CGT
3
CTT
2
CCT
7
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
1
T
GAC
7
GGC
6
GTC
11
GCC
8
C
TAC
8
TGC
11
Glu
TTC
7
TCC
11
A
CAC
3
CGC
1
CTC
0
CCC
2
G
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