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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
92
GGA
129
GTA
59
GCA
114
C
Leu
TAA
158
TGA
106
ochre
TTA
0
opal Sec
TCA
11
A
CAA
123
CGA
38
amber
CTA
0
Trp
CCA
109
G
C
Leu
AAG
6
Pro
AGG
0
His
ATG
0
Arg
ACG
115
T
GAG
120
GGG
78
GTG
76
GCG
15
C
TAG
127
TGG
117
Gln
TTG
152
TCG
117
A
CAG
30
CGG
12
CTG
31
CCG
33
G
A
Ile
AAT
4
Thr
AGT
5
Asn
ATT
0
Ser
ACT
0
T
GAT
46
GGT
95
GTT
136
GCT
104
C
TAT
26
TGT
156
Lys
TTT
174
Arg
TCT
166
A
Met
CAT
411
CGT
35
CTT
43
CCT
94
G
G
Val
AAC
0
Ala
AGC
1
Asp
ATC
0
Gly
ACC
1
T
GAC
119
GGC
69
GTC
74
GCC
145
C
TAC
68
TGC
58
Glu
TTC
131
TCC
77
A
CAC
5
CGC
13
CTC
20
CCC
24
G
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