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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
9
GGA
7
GTA
13
GCA
26
C
Leu
TAA
73
TGA
15
ochre
TTA
0
opal Sec
TCA
1
A
CAA
15
CGA
2
amber
CTA
0
Trp
CCA
14
G
C
Leu
AAG
0
Pro
AGG
1
His
ATG
0
Arg
ACG
19
T
GAG
6
GGG
4
GTG
10
GCG
4
C
TAG
17
TGG
18
Gln
TTG
17
TCG
2
A
CAG
5
CGG
3
CTG
0
CCG
3
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
10
GGT
7
GTT
42
GCT
16
C
TAT
14
TGT
51
Lys
TTT
47
Arg
TCT
87
A
Met
CAT
60
CGT
0
CTT
6
CCT
9
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
2
T
GAC
7
GGC
6
GTC
19
GCC
12
C
TAC
9
TGC
41
Glu
TTC
26
TCC
19
A
CAC
1
CGC
0
CTC
0
CCC
0
G
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