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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
3
GGA
7
GTA
19
GCA
29
C
Leu
TAA
94
TGA
13
ochre
TTA
0
opal Sec
TCA
0
A
CAA
15
CGA
2
amber
CTA
2
Trp
CCA
11
G
C
Leu
AAG
1
Pro
AGG
0
His
ATG
0
Arg
ACG
6
T
GAG
6
GGG
3
GTG
13
GCG
3
C
TAG
6
TGG
37
Gln
TTG
12
TCG
3
A
CAG
6
CGG
1
CTG
1
CCG
4
G
A
Ile
AAT
0
Thr
AGT
3
Asn
ATT
0
Ser
ACT
0
T
GAT
8
GGT
4
GTT
77
GCT
13
C
TAT
39
TGT
69
Lys
TTT
48
Arg
TCT
133
A
Met
CAT
98
CGT
2
CTT
4
CCT
8
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
2
GGC
4
GTC
33
GCC
21
C
TAC
15
TGC
55
Glu
TTC
39
TCC
25
A
CAC
1
CGC
0
CTC
2
CCC
6
G
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