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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
2
Tyr
ATA
0
Cys
ACA
0
T
GAA
51
GGA
123
GTA
40
GCA
72
C
Leu
TAA
120
TGA
65
ochre
TTA
0
opal Sec
TCA
8
A
CAA
78
CGA
19
amber
CTA
0
Trp
CCA
44
G
C
Leu
AAG
5
Pro
AGG
0
His
ATG
0
Arg
ACG
85
T
GAG
53
GGG
53
GTG
44
GCG
12
C
TAG
63
TGG
65
Gln
TTG
85
TCG
100
A
CAG
8
CGG
6
CTG
12
CCG
18
G
A
Ile
AAT
2
Thr
AGT
5
Asn
ATT
0
Ser
ACT
0
T
GAT
32
GGT
54
GTT
105
GCT
54
C
TAT
40
TGT
141
Lys
TTT
142
Arg
TCT
136
A
Met
CAT
295
CGT
21
CTT
21
CCT
42
G
G
Val
AAC
1
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
50
GGC
43
GTC
42
GCC
119
C
TAC
61
TGC
63
Glu
TTC
98
TCC
62
A
CAC
5
CGC
3
CTC
10
CCC
13
G
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