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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
71
GGA
49
GTA
47
GCA
84
C
Leu
TAA
90
TGA
75
ochre
TTA
0
opal Sec
TCA
10
A
CAA
69
CGA
27
amber
CTA
0
Trp
CCA
65
G
C
Leu
AAG
6
Pro
AGG
0
His
ATG
0
Arg
ACG
65
T
GAG
68
GGG
61
GTG
61
GCG
26
C
TAG
83
TGG
63
Gln
TTG
92
TCG
60
A
CAG
16
CGG
12
CTG
15
CCG
34
G
A
Ile
AAT
1
Thr
AGT
0
Asn
ATT
0
Ser
ACT
1
T
GAT
46
GGT
52
GTT
77
GCT
75
C
TAT
15
TGT
74
Lys
TTT
90
Arg
TCT
102
A
Met
CAT
214
CGT
32
CTT
23
CCT
67
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
45
GGC
52
GTC
56
GCC
77
C
TAC
72
TGC
55
Glu
TTC
71
TCC
71
A
CAC
10
CGC
7
CTC
13
CCC
17
G
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