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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
66
GGA
62
GTA
45
GCA
91
C
Leu
TAA
75
TGA
57
ochre
TTA
0
opal Sec
TCA
8
A
CAA
74
CGA
41
amber
CTA
0
Trp
CCA
59
G
C
Leu
AAG
15
Pro
AGG
0
His
ATG
0
Arg
ACG
55
T
GAG
65
GGG
65
GTG
72
GCG
15
C
TAG
84
TGG
55
Gln
TTG
94
TCG
46
A
CAG
37
CGG
22
CTG
20
CCG
37
G
A
Ile
AAT
3
Thr
AGT
1
Asn
ATT
0
Ser
ACT
0
T
GAT
47
GGT
56
GTT
61
GCT
70
C
TAT
10
TGT
72
Lys
TTT
77
Arg
TCT
115
A
Met
CAT
196
CGT
37
CTT
27
CCT
61
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
59
GGC
62
GTC
61
GCC
81
C
TAC
74
TGC
57
Glu
TTC
75
TCC
63
A
CAC
22
CGC
16
CTC
18
CCC
24
G
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