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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
1
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
48
GGA
76
GTA
40
GCA
75
C
Leu
TAA
108
TGA
50
ochre
TTA
0
opal Sec
TCA
4
A
CAA
70
CGA
16
amber
CTA
0
Trp
CCA
70
G
C
Leu
AAG
3
Pro
AGG
0
His
ATG
0
Arg
ACG
57
T
GAG
51
GGG
54
GTG
55
GCG
5
C
TAG
71
TGG
71
Gln
TTG
75
TCG
58
A
CAG
24
CGG
12
CTG
10
CCG
21
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
37
GGT
49
GTT
78
GCT
53
C
TAT
14
TGT
85
Lys
TTT
77
Arg
TCT
108
A
Met
CAT
170
CGT
31
CTT
14
CCT
44
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
2
T
GAC
44
GGC
46
GTC
50
GCC
74
C
TAC
65
TGC
65
Glu
TTC
69
TCC
63
A
CAC
4
CGC
10
CTC
8
CCC
15
G
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