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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
1
Cys
ACA
0
T
GAA
57
GGA
89
GTA
41
GCA
109
C
Leu
TAA
154
TGA
74
ochre
TTA
0
opal Sec
TCA
3
A
CAA
92
CGA
23
amber
CTA
0
Trp
CCA
66
G
C
Leu
AAG
6
Pro
AGG
0
His
ATG
0
Arg
ACG
62
T
GAG
50
GGG
68
GTG
59
GCG
27
C
TAG
73
TGG
55
Gln
TTG
104
TCG
67
A
CAG
10
CGG
5
CTG
10
CCG
24
G
A
Ile
AAT
3
Thr
AGT
3
Asn
ATT
0
Ser
ACT
6
T
GAT
39
GGT
37
GTT
88
GCT
59
C
TAT
38
TGT
111
Lys
TTT
101
Arg
TCT
170
A
Met
CAT
242
CGT
22
CTT
15
CCT
49
G
G
Val
AAC
0
Ala
AGC
1
Asp
ATC
1
Gly
ACC
0
T
GAC
49
GGC
43
GTC
58
GCC
73
C
TAC
78
TGC
79
Glu
TTC
85
TCC
76
A
CAC
5
CGC
4
CTC
6
CCC
10
G
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