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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[PDVI] alkali sediment metagenome; glacial lake sediment
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
8
GGA
3
GTA
6
GCA
7
C
Leu
TAA
3
TGA
4
ochre
TTA
0
opal Sec
TCA
4
A
CAA
4
CGA
2
amber
CTA
0
Trp
CCA
10
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
5
T
GAG
2
GGG
5
GTG
4
GCG
1
C
TAG
2
TGG
7
Gln
TTG
5
TCG
3
A
CAG
5
CGG
5
CTG
3
CCG
5
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
24
GGT
8
GTT
5
GCT
4
C
TAT
1
TGT
8
Lys
TTT
8
Arg
TCT
4
A
Met
CAT
10
CGT
6
CTT
5
CCT
4
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
6
GGC
3
GTC
7
GCC
7
C
TAC
4
TGC
21
Glu
TTC
4
TCC
7
A
CAC
6
CGC
4
CTC
2
CCC
5
G
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