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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
Metagenomic analysis of viruses in reclaimed water (SRP000673)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
11
GGA
11
GTA
22
GCA
8
C
Leu
TAA
12
TGA
9
ochre
TTA
1
opal Sec
TCA
7
A
CAA
10
CGA
1
amber
CTA
0
Trp
CCA
31
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
23
T
GAG
3
GGG
2
GTG
9
GCG
1
C
TAG
22
TGG
27
Gln
TTG
29
TCG
0
A
CAG
3
CGG
0
CTG
5
CCG
8
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
13
GGT
4
GTT
22
GCT
22
C
TAT
5
TGT
36
Lys
TTT
37
Arg
TCT
36
A
Met
CAT
131
CGT
0
CTT
2
CCT
5
G
G
Val
AAC
1
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
3
GGC
2
GTC
14
GCC
24
C
TAC
16
TGC
21
Glu
TTC
19
TCC
17
A
CAC
1
CGC
1
CTC
1
CCC
3
G
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