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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Anticodon table
Metagenomic characterization of a wastewater treatment plant (SRP000180)
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
18
GGA
11
GTA
18
GCA
10
C
Leu
TAA
17
TGA
17
ochre
TTA
0
opal Sec
TCA
4
A
CAA
15
CGA
9
amber
CTA
1
Trp
CCA
15
G
C
Leu
AAG
1
Pro
AGG
0
His
ATG
0
Arg
ACG
9
T
GAG
13
GGG
14
GTG
14
GCG
1
C
TAG
10
TGG
14
Gln
TTG
19
TCG
4
A
CAG
13
CGG
12
CTG
6
CCG
14
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
21
GGT
13
GTT
21
GCT
12
C
TAT
0
TGT
13
Lys
TTT
17
Arg
TCT
17
A
Met
CAT
39
CGT
17
CTT
14
CCT
15
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
15
GGC
8
GTC
18
GCC
13
C
TAC
15
TGC
20
Glu
TTC
25
TCC
13
A
CAC
11
CGC
4
CTC
4
CCC
11
G
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