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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Identical Sequence Group
454 Sequencing (SRP001809)
[ 100 % / outside this phylotype ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
18
GGA
16
GTA
18
GCA
22
C
Leu
TAA
13
TGA
14
ochre
TTA
0
opal Sec
TCA
2
A
CAA
16
CGA
10
amber
CTA
0
Trp
CCA
18
G
C
Leu
AAG
6
Pro
AGG
0
His
ATG
0
Arg
ACG
8
T
GAG
12
GGG
13
GTG
22
GCG
5
C
TAG
21
TGG
15
Gln
TTG
18
TCG
10
A
CAG
17
CGG
14
CTG
17
CCG
11
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
21
GGT
15
GTT
14
GCT
9
C
TAT
6
TGT
19
Lys
TTT
16
Arg
TCT
23
A
Met
CAT
44
CGT
12
CTT
15
CCT
19
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
13
GGC
19
GTC
14
GCC
18
C
TAC
18
TGC
25
Glu
TTC
18
TCC
17
A
CAC
11
CGC
10
CTC
11
CCC
14
G
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