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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Identical Sequence Group
Bacteria
Acidithiobacillia
[ 97 % / outside this phylotype ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
10
GGA
2
GTA
3
GCA
6
C
Leu
TAA
2
TGA
4
ochre
TTA
0
opal Sec
TCA
0
A
CAA
4
CGA
4
amber
CTA
0
Trp
CCA
6
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
5
T
GAG
6
GGG
3
GTG
5
GCG
0
C
TAG
7
TGG
7
Gln
TTG
6
TCG
0
A
CAG
3
CGG
3
CTG
3
CCG
3
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
2
GGT
8
GTT
5
GCT
4
C
TAT
0
TGT
5
Lys
TTT
3
Arg
TCT
5
A
Met
CAT
16
CGT
5
CTT
4
CCT
6
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
6
GGC
3
GTC
5
GCC
7
C
TAC
3
TGC
6
Glu
TTC
7
TCC
11
A
CAC
5
CGC
2
CTC
5
CCC
3
G
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