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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Identical Sequence Group
Brazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
[ 100 % ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
2
GGA
4
GTA
0
GCA
5
C
Leu
TAA
1
TGA
1
ochre
TTA
0
opal Sec
TCA
0
A
CAA
3
CGA
3
amber
CTA
0
Trp
CCA
1
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
0
T
GAG
0
GGG
1
GTG
5
GCG
0
C
TAG
1
TGG
0
Gln
TTG
5
TCG
3
A
CAG
0
CGG
5
CTG
5
CCG
3
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
4
GGT
2
GTT
3
GCT
1
C
TAT
0
TGT
0
Lys
TTT
3
Arg
TCT
2
A
Met
CAT
5
CGT
1
CTT
1
CCT
4
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
7
GGC
6
GTC
0
GCC
0
C
TAC
3
TGC
0
Glu
TTC
2
TCC
1
A
CAC
3
CGC
1
CTC
0
CCC
3
G
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